Analysis of interatomic Contacts of Structural Units in PDB entry:
7UXS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UXS entry

There are 2 chains in PDB entry 7UXS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ALA 283ASN 476
A
 SER 281ASN 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7UXS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
298 316Right-handed alpha
Helix 2
AA2
B
328 342Right-handed alpha
Helix 3
AA3
B
346 350Right-handed 310
Helix 4
AA4
B
360 366Right-handed alpha
Helix 5
AA5
B
366 376Right-handed alpha
Helix 6
AA6
B
397 410Right-handed alpha
Helix 7
AA7
B
418 420Right-handed 310
Helix 8
AA8
B
421 434Right-handed alpha
Helix 9
AA9
B
434 439Right-handed alpha
Helix 10
AB1
B
443 453Right-handed alpha
Helix 11
AB2
B
459 475Right-handed alpha
Helix 12
AB3
A
298 316Right-handed alpha
Helix 13
AB4
A
328 343Right-handed alpha
Helix 14
AB5
A
346 350Right-handed 310
Helix 15
AB6
A
360 366Right-handed alpha
Helix 16
AB7
A
366 376Right-handed alpha
Helix 17
AB8
A
397 410Right-handed alpha
Helix 18
AB9
A
418 420Right-handed 310
Helix 19
AC1
A
421 434Right-handed alpha
Helix 20
AC2
A
434 439Right-handed alpha
Helix 21
AC3
A
443 453Right-handed alpha
Helix 22
AC4
A
459 476Right-handed alpha
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There are 4 sheets in PDB entry 7UXS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
352 354first strand
Strand 2
B
319 322parallel
Strand 3
B
284 290parallel
Strand 4
B
380 385parallel
Strand 5
B
413 416parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 390first strand
Strand 2
B
393 396anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
352 354first strand
Strand 2
A
319 322parallel
Strand 3
A
284 290parallel
Strand 4
A
380 385parallel
Strand 5
A
413 416parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
393 396anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il