Analysis of interatomic Contacts of Structural Units in PDB entry:
7UY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UY3 entry

There are 2 chains in PDB entry 7UY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 139GLN 526
A
 GLU 528PRO 531
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7UY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
142 146Right-handed 310
Helix 2
AA2
A
154 163Right-handed alpha
Helix 3
AA3
A
222 231Right-handed alpha
Helix 4
AA4
A
263 265Right-handed 310
Helix 5
AA5
A
303 317Right-handed alpha
Helix 6
AA6
A
346 352Right-handed alpha
Helix 7
AA7
A
352 357Right-handed alpha
Helix 8
AA8
A
359 380Right-handed alpha
Helix 9
AA9
A
388 390Right-handed 310
Helix 10
AB1
A
406 411Right-handed 310
Helix 11
AB2
A
430 437Right-handed alpha
Helix 12
AB3
A
440 457Right-handed alpha
Helix 13
AB4
A
467 477Right-handed alpha
Helix 14
AB5
A
488 498Right-handed alpha
Helix 15
AB6
A
502 506Right-handed 310
Helix 16
AB7
A
508 518Right-handed alpha
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There are 4 sheets in PDB entry 7UY3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
172 176first strand
Strand 2
A
184 192anti-parallel
Strand 3
A
196 204anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
219 220anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
267 274first strand
Strand 2
A
281 286anti-parallel
Strand 3
A
290 296anti-parallel
Strand 4
A
335 339anti-parallel
Strand 5
A
325 329anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 345first strand
Strand 2
A
392 394anti-parallel
Strand 3
A
400 402anti-parallel
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