Analysis of interatomic Contacts of Structural Units in PDB entry:
7UY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UY7 entry

There are 6 chains in PDB entry 7UY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 8ASN 622
B
 ASP 3HIS 360
C
 PHE 8ASN 164
D
 ILE 184GLN 208
E
 VAL 245LEU 1207
F
 G 1 G 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 68 helices in PDB entry 7UY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 32Right-handed alpha
Helix 2
AA2
A
98 108Right-handed alpha
Helix 3
AA3
A
167 179Right-handed alpha
Helix 4
AA4
A
191 197Right-handed alpha
Helix 5
AA5
A
203 209Right-handed alpha
Helix 6
AA6
A
231 239Right-handed alpha
Helix 7
AA7
A
276 286Right-handed alpha
Helix 8
AA8
A
303 305Right-handed 310
Helix 9
AA9
A
322 329Right-handed alpha
Helix 10
AB1
A
342 351Right-handed alpha
Helix 11
AB2
A
353 360Right-handed alpha
Helix 12
AB3
A
366 371Right-handed alpha
Helix 13
AB4
A
445 453Right-handed alpha
Helix 14
AB5
A
456 470Right-handed alpha
Helix 15
AB6
A
485 497Right-handed alpha
Helix 16
AB7
A
518 540Right-handed alpha
Helix 17
AB8
A
576 579Right-handed 310
Helix 18
AB9
A
599 622Right-handed alpha
Helix 19
AC1
B
9 13Right-handed 310
Helix 20
AC2
B
108 136Right-handed alpha
Helix 21
AC3
B
178 195Right-handed alpha
Helix 22
AC4
B
196 203Right-handed alpha
Helix 23
AC5
B
232 238Right-handed alpha
Helix 24
AC6
B
239 247Right-handed alpha
Helix 25
AC7
B
254 272Right-handed alpha
Helix 26
AC8
B
290 306Right-handed alpha
Helix 27
AC9
B
307 309Right-handed 310
Helix 28
AD1
B
314 327Right-handed alpha
Helix 29
AD2
B
337 352Right-handed alpha
Helix 30
AD3
C
15 23Right-handed alpha
Helix 31
AD4
C
24 26Right-handed 310
Helix 32
AD5
C
48 61Right-handed alpha
Helix 33
AD6
C
64 87Right-handed alpha
Helix 34
AD7
C
151 160Right-handed alpha
Helix 35
AD8
C
161 164Right-handed 310
Helix 36
AD9
D
186 197Right-handed alpha
Helix 37
AE1
E
247 251Right-handed 310
Helix 38
AE2
E
314 330Right-handed alpha
Helix 39
AE3
E
390 400Right-handed alpha
Helix 40
AE4
E
491 498Right-handed 310
Helix 41
AE5
E
511 515Right-handed 310
Helix 42
AE6
E
531 547Right-handed alpha
Helix 43
AE7
E
559 567Right-handed alpha
Helix 44
AE8
E
568 572Right-handed 310
Helix 45
AE9
E
573 574Right-handed 310
Helix 46
AF1
E
575 580Right-handed alpha
Helix 47
AF2
E
595 604Right-handed alpha
Helix 48
AF3
E
612 620Right-handed alpha
Helix 49
AF4
E
626 635Right-handed alpha
Helix 50
AF5
E
643 652Right-handed 310
Helix 51
AF6
E
653 679Right-handed alpha
Helix 52
AF7
E
679 692Right-handed alpha
Helix 53
AF8
E
694 701Right-handed alpha
Helix 54
AF9
E
702 718Right-handed alpha
Helix 55
AG1
E
730 749Right-handed alpha
Helix 56
AG2
E
790 800Right-handed alpha
Helix 57
AG3
E
813 818Right-handed alpha
Helix 58
AG4
E
819 822Right-handed 310
Helix 59
AG5
E
871 893Right-handed alpha
Helix 60
AG6
E
896 923Right-handed alpha
Helix 61
AG7
E
930 955Right-handed alpha
Helix 62
AG8
E
975 994Right-handed alpha
Helix 63
AG9
E
1054 1067Right-handed alpha
Helix 64
AH1
E
1072 1080Right-handed alpha
Helix 65
AH2
E
1082 1087Right-handed 310
Helix 66
AH3
E
1184 1192Right-handed alpha
Helix 67
AH4
E
1193 1195Right-handed 310
Helix 68
AH5
E
1199 1207Right-handed alpha
Back to top of page

There are 21 sheets in PDB entry 7UY7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 67first strand
Strand 2
A
73 78anti-parallel
Strand 3
A
93 94anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 84first strand
Strand 2
A
87 90anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 123first strand
Strand 2
A
152 153anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
162 163first strand
Strand 2
D
203 204anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
A
374 375anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
297 302anti-parallel
Strand 3
A
306 312anti-parallel
Strand 4
A
265 270parallel
Strand 5
A
251 257anti-parallel
Strand 6
A
226 227anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 215first strand
Strand 2
A
297 302anti-parallel
Strand 3
A
306 312anti-parallel
Strand 4
A
265 270parallel
Strand 5
A
251 257anti-parallel
Strand 6
A
218 222anti-parallel
Strand 7
A
291 294anti-parallel
Strand 8
A
335 337anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 397first strand
Strand 2
A
421 432anti-parallel
Strand 3
A
439 444anti-parallel
Strand 4
A
589 594parallel
Strand 5
A
501 508anti-parallel
Strand 6
A
380 397anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
569 575first strand
Strand 2
A
580 586anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
21 28first strand
Strand 2
B
49 53anti-parallel
Strand 3
B
58 62anti-parallel
Strand 4
B
94 105parallel
Strand 5
B
79 89anti-parallel
Strand 6
B
21 28anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 277first strand
Strand 2
B
287 289anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
143 145first strand
Strand 2
C
122 131anti-parallel
Strand 3
C
137 139anti-parallel
Strand 4
C
102 107parallel
Strand 5
C
94 99anti-parallel
Strand 6
C
35 46anti-parallel
Strand 7
C
122 131anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
261 262first strand
Strand 2
E
405 408anti-parallel
Strand 3
E
437 438anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
264 266first strand
Strand 2
E
275 283anti-parallel
Strand 3
E
290 298anti-parallel
Strand 4
E
426 429parallel
Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
307 308first strand
Strand 2
E
381 383anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
356 362first strand
Strand 2
E
341 347anti-parallel
Strand 3
E
720 721parallel
Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
526 528first strand
Strand 2
E
499 504parallel
Strand 3
E
467 482anti-parallel
Strand 4
E
450 464anti-parallel
Strand 5
E
550 553parallel
Strand 6
E
608 611parallel
Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
778 779first strand
Strand 2
E
1007 1012anti-parallel
Strand 3
E
1015 1019anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
783 784first strand
Strand 2
E
1004 1005anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
787 788first strand
Strand 2
E
999 1000anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
962 963first strand
Strand 2
E
966 967anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il