Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UYH entry

There are 3 chains in PDB entry 7UYH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1GLY 75
A
 MET 1THR 276
B
 MET 1GLY 76
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 7UYH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
22 35Right-handed alpha
Helix 2
AA2
C
37 39Right-handed 310
Helix 3
AA3
C
56 60Right-handed 310
Helix 4
AA4
A
12 28Right-handed alpha
Helix 5
AA5
A
31 35Right-handed 310
Helix 6
AA6
A
37 51Right-handed alpha
Helix 7
AA7
A
58 69Right-handed alpha
Helix 8
AA8
A
71 89Right-handed alpha
Helix 9
AA9
A
94 115Right-handed alpha
Helix 10
AB1
A
118 122Right-handed 310
Helix 11
AB2
A
133 139Right-handed alpha
Helix 12
AB3
A
144 156Right-handed alpha
Helix 13
AB4
A
157 159Right-handed 310
Helix 14
AB5
A
164 176Right-handed alpha
Helix 15
AB6
A
176 189Right-handed alpha
Helix 16
AB7
A
192 196Right-handed 310
Helix 17
AB8
A
199 202Right-handed 310
Helix 18
AB9
A
203 210Right-handed alpha
Helix 19
AC1
A
244 251Right-handed alpha
Helix 20
AC2
A
261 268Right-handed alpha
Helix 21
AC3
B
22 35Right-handed alpha
Helix 22
AC4
B
37 39Right-handed 310
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There are 3 sheets in PDB entry 7UYH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
12 16first strand
Strand 2
C
2 6anti-parallel
Strand 3
C
66 71parallel
Strand 4
C
41 45anti-parallel
Strand 5
C
48 49anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
238 243anti-parallel
Strand 3
A
227 233anti-parallel
Strand 4
A
212 216parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
12 16first strand
Strand 2
B
2 7anti-parallel
Strand 3
B
66 71parallel
Strand 4
B
41 45anti-parallel
Strand 5
B
48 49anti-parallel
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