Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UYI entry

There are 3 chains in PDB entry 7UYI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 0	LYS 494
B	ALA 0	SER 493
C	ALA 0	PRO 304

There are 51 helices in PDB entry 7UYI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	56	63	Right-handed alpha
Helix 2	AA2	A	64	73	Right-handed 310
Helix 3	AA3	A	97	106	Right-handed alpha
Helix 4	AA4	A	184	192	Right-handed alpha
Helix 5	AA5	A	364	386	Right-handed alpha
Helix 6	AA6	A	401	453	Right-handed alpha
Helix 7	AA7	A	472	482	Right-handed alpha
Helix 8	AA8	A	486	490	Right-handed 310
Helix 9	AA9	B	56	63	Right-handed alpha
Helix 10	AB1	B	64	73	Right-handed 310
Helix 11	AB2	B	97	106	Right-handed alpha
Helix 12	AB3	B	184	192	Right-handed alpha
Helix 13	AB4	B	364	386	Right-handed alpha
Helix 14	AB5	B	401	453	Right-handed alpha
Helix 15	AB6	B	472	482	Right-handed alpha
Helix 16	AB7	C	56	63	Right-handed alpha
Helix 17	AB8	C	64	73	Right-handed 310
Helix 18	AB9	C	97	107	Right-handed alpha
Helix 19	AC1	C	118	123	Right-handed alpha
Helix 20	AC2	C	184	192	Right-handed alpha
Helix 21	AC3	C	364	386	Right-handed alpha
Helix 22	AC4	C	401	453	Right-handed alpha
Helix 23	AC5	C	472	482	Right-handed alpha
Helix 24	AC6	C	486	490	Right-handed 310
Helix 25	AC7	E	56	63	Right-handed alpha
Helix 26	AC8	E	64	71	Right-handed 310
Helix 27	AC9	E	97	106	Right-handed alpha
Helix 28	AD1	E	118	123	Right-handed alpha
Helix 29	AD2	E	184	193	Right-handed alpha
Helix 30	AD3	E	364	386	Right-handed alpha
Helix 31	AD4	E	401	453	Right-handed alpha
Helix 32	AD5	E	472	482	Right-handed alpha
Helix 33	AD6	E	486	490	Right-handed 310
Helix 34	AD7	F	56	63	Right-handed alpha
Helix 35	AD8	F	64	68	Right-handed 310
Helix 36	AD9	F	97	106	Right-handed alpha
Helix 37	AE1	F	118	123	Right-handed alpha
Helix 38	AE2	F	184	193	Right-handed alpha
Helix 39	AE3	F	364	386	Right-handed alpha
Helix 40	AE4	F	401	453	Right-handed alpha
Helix 41	AE5	F	472	482	Right-handed alpha
Helix 42	AE6	F	485	490	Right-handed alpha
Helix 43	AE7	D	56	63	Right-handed alpha
Helix 44	AE8	D	64	73	Right-handed 310
Helix 45	AE9	D	97	107	Right-handed alpha
Helix 46	AF1	D	118	123	Right-handed alpha
Helix 47	AF2	D	184	193	Right-handed alpha
Helix 48	AF3	D	364	386	Right-handed alpha
Helix 49	AF4	D	401	451	Right-handed alpha
Helix 50	AF5	D	472	482	Right-handed alpha
Helix 51	AF6	D	486	490	Right-handed 310

There are 67 sheets in PDB entry 7UYI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1, AH2, AH3, AH4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	358	363	first strand
Strand 2	A	349	355	anti-parallel
Strand 3	A	2	7	anti-parallel
Strand 4	A	464	467	anti-parallel
Strand 5	A	457	459	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	15	16	first strand
Strand 2	A	24	25	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	31	first strand
Strand 2	A	313	315	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	292	293	parallel
Strand 3	A	305	306	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	44	first strand
Strand 2	A	272	277	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	51	first strand
Strand 2	A	79	81	parallel
Strand 3	A	265	267	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	114	first strand
Strand 2	A	254	259	anti-parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	248	251	anti-parallel
Strand 5	A	148	150	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	114	first strand
Strand 2	A	254	259	anti-parallel
Strand 3	A	172	181	anti-parallel
Strand 4	A	226	234	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	138	first strand
Strand 2	A	141	143	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	166	first strand
Strand 2	A	239	244	anti-parallel
Strand 3	A	199	202	anti-parallel
Strand 4	A	207	210	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	279	280	first strand
Strand 2	A	300	301	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	363	first strand
Strand 2	B	349	354	anti-parallel
Strand 3	B	2	7	anti-parallel
Strand 4	B	464	467	anti-parallel
Strand 5	B	457	459	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	15	16	first strand
Strand 2	B	24	25	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	29	31	first strand
Strand 2	B	313	315	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	34	first strand
Strand 2	B	292	293	parallel
Strand 3	B	305	306	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	44	first strand
Strand 2	B	272	277	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	51	first strand
Strand 2	B	79	81	parallel
Strand 3	B	265	267	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	114	first strand
Strand 2	B	254	259	anti-parallel
Strand 3	B	172	181	anti-parallel
Strand 4	B	248	251	anti-parallel
Strand 5	B	148	150	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	114	first strand
Strand 2	B	254	259	anti-parallel
Strand 3	B	172	181	anti-parallel
Strand 4	B	226	234	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	138	first strand
Strand 2	B	141	143	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	166	first strand
Strand 2	B	239	244	anti-parallel
Strand 3	B	199	202	anti-parallel
Strand 4	B	207	210	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	279	280	first strand
Strand 2	B	300	301	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	359	363	first strand
Strand 2	C	349	354	anti-parallel
Strand 3	C	2	7	anti-parallel
Strand 4	C	464	467	anti-parallel
Strand 5	C	457	459	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	15	16	first strand
Strand 2	C	24	25	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	31	first strand
Strand 2	C	313	315	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	34	first strand
Strand 2	C	292	293	parallel
Strand 3	C	305	306	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	44	first strand
Strand 2	C	272	277	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	51	first strand
Strand 2	C	79	81	parallel
Strand 3	C	265	267	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	114	first strand
Strand 2	C	254	259	anti-parallel
Strand 3	C	172	181	anti-parallel
Strand 4	C	248	251	anti-parallel
Strand 5	C	148	150	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	114	first strand
Strand 2	C	254	259	anti-parallel
Strand 3	C	172	181	anti-parallel
Strand 4	C	226	234	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	138	first strand
Strand 2	C	141	143	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	166	first strand
Strand 2	C	239	244	anti-parallel
Strand 3	C	199	202	anti-parallel
Strand 4	C	207	210	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	285	286	first strand
Strand 2	C	279	280	anti-parallel
Strand 3	C	300	301	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	341	first strand
Strand 2	E	3	8	parallel
Strand 3	E	349	352	anti-parallel
Strand 4	E	362	363	anti-parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	340	341	first strand
Strand 2	E	3	8	parallel
Strand 3	E	464	467	anti-parallel
Strand 4	E	457	459	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	15	16	first strand
Strand 2	E	24	25	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	31	first strand
Strand 2	E	313	315	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	34	first strand
Strand 2	E	292	293	parallel
Strand 3	E	305	306	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	44	first strand
Strand 2	E	272	277	parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	50	51	first strand
Strand 2	E	79	81	parallel
Strand 3	E	265	267	parallel

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There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	114	first strand
Strand 2	E	254	259	anti-parallel
Strand 3	E	172	181	anti-parallel
Strand 4	E	248	251	anti-parallel
Strand 5	E	148	150	anti-parallel

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There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	114	first strand
Strand 2	E	254	259	anti-parallel
Strand 3	E	172	181	anti-parallel
Strand 4	E	226	234	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	133	138	first strand
Strand 2	E	141	143	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	161	166	first strand
Strand 2	E	239	244	anti-parallel
Strand 3	E	199	202	anti-parallel
Strand 4	E	207	210	anti-parallel

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There are 3 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	285	286	first strand
Strand 2	E	279	280	anti-parallel
Strand 3	E	300	301	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	362	363	first strand
Strand 2	F	349	354	anti-parallel
Strand 3	F	2	7	anti-parallel
Strand 4	F	464	467	anti-parallel
Strand 5	F	457	459	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	15	16	first strand
Strand 2	F	24	25	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	31	first strand
Strand 2	F	313	315	anti-parallel

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There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	34	first strand
Strand 2	F	292	293	parallel
Strand 3	F	305	306	parallel

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There are 2 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	44	first strand
Strand 2	F	272	277	parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	50	53	first strand
Strand 2	F	79	81	parallel
Strand 3	F	265	267	parallel

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There are 5 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	114	first strand
Strand 2	F	254	259	anti-parallel
Strand 3	F	172	181	anti-parallel
Strand 4	F	248	251	anti-parallel
Strand 5	F	148	150	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	114	first strand
Strand 2	F	254	259	anti-parallel
Strand 3	F	172	181	anti-parallel
Strand 4	F	226	234	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	133	138	first strand
Strand 2	F	141	143	anti-parallel

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There are 4 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	161	166	first strand
Strand 2	F	239	244	anti-parallel
Strand 3	F	199	202	anti-parallel
Strand 4	F	207	210	anti-parallel

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There are 2 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	279	280	first strand
Strand 2	F	300	301	anti-parallel

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There are 4 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	340	341	first strand
Strand 2	D	5	8	parallel
Strand 3	D	349	351	anti-parallel
Strand 4	D	362	363	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	15	16	first strand
Strand 2	D	24	25	anti-parallel

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There are 2 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	29	31	first strand
Strand 2	D	313	315	anti-parallel

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There are 3 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	34	first strand
Strand 2	D	292	293	parallel
Strand 3	D	305	306	parallel

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There are 2 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	44	first strand
Strand 2	D	272	277	parallel

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There are 3 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	51	first strand
Strand 2	D	79	81	parallel
Strand 3	D	265	267	parallel

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There are 5 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	114	first strand
Strand 2	D	254	259	anti-parallel
Strand 3	D	172	181	anti-parallel
Strand 4	D	248	251	anti-parallel
Strand 5	D	148	150	anti-parallel

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There are 4 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	114	first strand
Strand 2	D	254	259	anti-parallel
Strand 3	D	172	181	anti-parallel
Strand 4	D	226	234	anti-parallel

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There are 2 strands in AH2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	138	first strand
Strand 2	D	141	143	anti-parallel

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There are 4 strands in AH3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	166	first strand
Strand 2	D	239	244	anti-parallel
Strand 3	D	199	202	anti-parallel
Strand 4	D	207	210	anti-parallel

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There are 3 strands in AH4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	286	first strand
Strand 2	D	279	280	anti-parallel
Strand 3	D	300	301	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UYI

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYI