Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UYX entry

There are 4 chains in PDB entry 7UYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 192
B
 MET 1SER 192
C
 MET 1LYS 190
D
 MET 1ILE 154
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 7UYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 22Right-handed alpha
Helix 2
AA2
A
54 66Right-handed alpha
Helix 3
AA3
A
68 72Right-handed 310
Helix 4
AA4
A
74 84Right-handed alpha
Helix 5
AA5
A
85 93Right-handed alpha
Helix 6
AA6
A
149 164Right-handed alpha
Helix 7
AA7
A
165 170Right-handed 310
Helix 8
AA8
B
8 23Right-handed alpha
Helix 9
AA9
B
54 66Right-handed alpha
Helix 10
AB1
B
68 73Right-handed 310
Helix 11
AB2
B
74 83Right-handed alpha
Helix 12
AB3
B
85 94Right-handed alpha
Helix 13
AB4
B
149 162Right-handed alpha
Helix 14
AB5
B
164 168Right-handed 310
Helix 15
AB6
C
8 21Right-handed alpha
Helix 16
AB7
C
54 66Right-handed alpha
Helix 17
AB8
C
68 73Right-handed 310
Helix 18
AB9
C
74 84Right-handed alpha
Helix 19
AC1
C
85 94Right-handed alpha
Helix 20
AC2
C
149 162Right-handed alpha
Helix 21
AC3
C
165 170Right-handed 310
Helix 22
AC4
D
8 22Right-handed alpha
Helix 23
AC5
D
54 66Right-handed alpha
Helix 24
AC6
D
68 72Right-handed 310
Helix 25
AC7
D
74 84Right-handed alpha
Helix 26
AC8
D
85 94Right-handed alpha
Helix 27
AC9
D
149 162Right-handed alpha
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There are 6 sheets in PDB entry 7UYX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
B
138 145parallel
Strand 3
B
111 119anti-parallel
Strand 4
B
97 106anti-parallel
Strand 5
B
178 183anti-parallel
Strand 6
B
186 191anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 53first strand
Strand 2
A
39 43anti-parallel
Strand 3
B
39 43anti-parallel
Strand 4
B
49 53anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 191first strand
Strand 2
A
178 183anti-parallel
Strand 3
A
97 106anti-parallel
Strand 4
A
111 119anti-parallel
Strand 5
A
139 146anti-parallel
Strand 6
B
2 4parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
2 4first strand
Strand 2
D
139 146parallel
Strand 3
D
111 119anti-parallel
Strand 4
D
97 106anti-parallel
Strand 5
D
178 182anti-parallel
Strand 6
D
187 191anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
49 53first strand
Strand 2
C
39 43anti-parallel
Strand 3
D
39 43anti-parallel
Strand 4
D
49 53anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
187 190first strand
Strand 2
C
178 182anti-parallel
Strand 3
C
97 106anti-parallel
Strand 4
C
111 119anti-parallel
Strand 5
C
138 146anti-parallel
Strand 6
D
2 4parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il