Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UYY entry

There are 2 chains in PDB entry 7UYY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	SER 496
B	MET 1	SER 496

There are 42 helices in PDB entry 7UYY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	16	Right-handed alpha
Helix 2	AA2	A	56	74	Right-handed alpha
Helix 3	AA3	A	80	98	Right-handed alpha
Helix 4	AA4	A	98	111	Right-handed alpha
Helix 5	AA5	A	113	120	Right-handed alpha
Helix 6	AA6	A	120	136	Right-handed alpha
Helix 7	AA7	A	137	139	Right-handed 310
Helix 8	AA8	A	170	185	Right-handed alpha
Helix 9	AA9	A	194	197	Right-handed 310
Helix 10	AB1	A	198	212	Right-handed alpha
Helix 11	AB2	A	224	235	Right-handed alpha
Helix 12	AB3	A	246	260	Right-handed alpha
Helix 13	AB4	A	283	297	Right-handed alpha
Helix 14	AB5	A	298	301	Right-handed 310
Helix 15	AB6	A	315	328	Right-handed alpha
Helix 16	AB7	A	347	364	Right-handed alpha
Helix 17	AB8	A	392	397	Right-handed alpha
Helix 18	AB9	A	411	421	Right-handed alpha
Helix 19	AC1	A	434	445	Right-handed alpha
Helix 20	AC2	A	467	469	Right-handed 310
Helix 21	AC3	A	480	485	Right-handed alpha
Helix 22	AC4	B	6	17	Right-handed alpha
Helix 23	AC5	B	56	74	Right-handed alpha
Helix 24	AC6	B	80	98	Right-handed alpha
Helix 25	AC7	B	98	111	Right-handed alpha
Helix 26	AC8	B	113	120	Right-handed alpha
Helix 27	AC9	B	120	136	Right-handed alpha
Helix 28	AD1	B	137	139	Right-handed 310
Helix 29	AD2	B	170	185	Right-handed alpha
Helix 30	AD3	B	194	197	Right-handed 310
Helix 31	AD4	B	198	211	Right-handed alpha
Helix 32	AD5	B	228	235	Right-handed alpha
Helix 33	AD6	B	246	259	Right-handed alpha
Helix 34	AD7	B	283	297	Right-handed alpha
Helix 35	AD8	B	298	301	Right-handed 310
Helix 36	AD9	B	315	328	Right-handed alpha
Helix 37	AE1	B	347	364	Right-handed alpha
Helix 38	AE2	B	392	397	Right-handed alpha
Helix 39	AE3	B	411	420	Right-handed alpha
Helix 40	AE4	B	434	445	Right-handed alpha
Helix 41	AE5	B	467	469	Right-handed 310
Helix 42	AE6	B	480	485	Right-handed alpha

There are 10 sheets in PDB entry 7UYY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	23	25	first strand
Strand 2	A	28	30	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	41	first strand
Strand 2	A	48	53	anti-parallel

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There are 10 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	143	first strand
Strand 2	A	150	158	anti-parallel
Strand 3	A	486	494	anti-parallel
Strand 4	B	449	452	parallel
Strand 5	B	427	431	parallel
Strand 6	B	273	277	parallel
Strand 7	B	306	312	parallel
Strand 8	B	403	409	parallel
Strand 9	B	383	386	parallel
Strand 10	B	367	370	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	218	220	first strand
Strand 2	A	188	192	parallel
Strand 3	A	161	165	parallel
Strand 4	A	240	244	parallel
Strand 5	A	264	268	parallel
Strand 6	A	471	472	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	367	370	first strand
Strand 2	A	383	386	anti-parallel
Strand 3	A	403	409	parallel
Strand 4	A	306	312	parallel
Strand 5	A	273	277	parallel
Strand 6	A	428	431	parallel
Strand 7	A	449	452	parallel
Strand 8	B	486	494	parallel
Strand 9	B	150	158	anti-parallel
Strand 10	B	142	143	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	374	375	first strand
Strand 2	A	379	380	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	23	25	first strand
Strand 2	B	28	30	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	37	41	first strand
Strand 2	B	48	53	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	218	220	first strand
Strand 2	B	188	192	parallel
Strand 3	B	161	165	parallel
Strand 4	B	240	244	parallel
Strand 5	B	264	268	parallel
Strand 6	B	471	472	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	374	375	first strand
Strand 2	B	379	380	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UYY

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UYY