Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UZC entry

There are 6 chains in PDB entry 7UZC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 333	LYS 528
B	THR 333	LYS 528
E	GLN 1	SER 230
F	ASP 1	CYS 234
H	GLN 1	SER 230
L	ASP 1	CYS 234

There are 35 helices in PDB entry 7UZC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	337	343	Right-handed alpha
Helix 2	AA2	A	349	353	Right-handed 310
Helix 3	AA3	A	365	370	Right-handed alpha
Helix 4	AA4	A	383	389	Right-handed 310
Helix 5	AA5	A	405	410	Right-handed 310
Helix 6	AA6	A	416	422	Right-handed alpha
Helix 7	AA7	A	438	443	Right-handed alpha
Helix 8	AA8	A	502	505	Right-handed 310
Helix 9	AA9	B	337	343	Right-handed alpha
Helix 10	AB1	B	349	353	Right-handed 310
Helix 11	AB2	B	365	370	Right-handed alpha
Helix 12	AB3	B	383	389	Right-handed 310
Helix 13	AB4	B	405	410	Right-handed 310
Helix 14	AB5	B	416	422	Right-handed alpha
Helix 15	AB6	B	438	443	Right-handed alpha
Helix 16	AB7	B	502	505	Right-handed 310
Helix 17	AB8	E	29	37	Right-handed 310
Helix 18	AB9	E	69	72	Right-handed 310
Helix 19	AC1	E	95	99	Right-handed 310
Helix 20	AC2	E	146	148	Right-handed 310
Helix 21	AC3	E	202	207	Right-handed alpha
Helix 22	AC4	E	216	219	Right-handed 310
Helix 23	AC5	F	95	99	Right-handed 310
Helix 24	AC6	F	141	147	Right-handed alpha
Helix 25	AC7	F	203	208	Right-handed alpha
Helix 26	AC8	H	29	37	Right-handed 310
Helix 27	AC9	H	69	72	Right-handed 310
Helix 28	AD1	H	82	84	Right-handed 310
Helix 29	AD2	H	95	99	Right-handed 310
Helix 30	AD3	H	171	173	Right-handed 310
Helix 31	AD4	H	202	207	Right-handed alpha
Helix 32	AD5	H	216	219	Right-handed 310
Helix 33	AD6	L	95	99	Right-handed 310
Helix 34	AD7	L	141	147	Right-handed alpha
Helix 35	AD8	L	203	208	Right-handed alpha

There are 32 sheets in PDB entry 7UZC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	403	anti-parallel
Strand 3	A	507	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	380	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	362	first strand
Strand 2	A	524	525	parallel
Strand 3	A	391	392	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	403	anti-parallel
Strand 3	B	507	516	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	376	380	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	361	362	first strand
Strand 2	B	524	525	parallel
Strand 3	B	391	392	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	5	first strand
Strand 2	E	19	26	anti-parallel
Strand 3	E	86	91	anti-parallel
Strand 4	E	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	13	first strand
Strand 2	E	122	126	parallel
Strand 3	E	100	107	anti-parallel
Strand 4	E	38	44	anti-parallel
Strand 5	E	50	57	anti-parallel
Strand 6	E	64	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	9	13	first strand
Strand 2	E	122	126	parallel
Strand 3	E	100	107	anti-parallel
Strand 4	E	117	118	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	139	first strand
Strand 2	E	150	160	anti-parallel
Strand 3	E	191	200	anti-parallel
Strand 4	E	178	180	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	135	139	first strand
Strand 2	E	150	160	anti-parallel
Strand 3	E	191	200	anti-parallel
Strand 4	E	184	185	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	169	first strand
Strand 2	E	209	215	anti-parallel
Strand 3	E	220	226	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	4	7	first strand
Strand 2	F	19	25	anti-parallel
Strand 3	F	86	91	anti-parallel
Strand 4	F	76	83	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	14	first strand
Strand 2	F	122	127	parallel
Strand 3	F	100	106	anti-parallel
Strand 4	F	39	44	anti-parallel
Strand 5	F	51	55	anti-parallel
Strand 6	F	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	14	first strand
Strand 2	F	122	127	parallel
Strand 3	F	100	106	anti-parallel
Strand 4	F	117	118	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	30	31	first strand
Strand 2	F	36	37	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	134	138	first strand
Strand 2	F	149	159	anti-parallel
Strand 3	F	193	202	anti-parallel
Strand 4	F	179	183	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	173	175	first strand
Strand 2	F	165	170	anti-parallel
Strand 3	F	211	217	anti-parallel
Strand 4	F	225	230	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	5	first strand
Strand 2	H	19	26	anti-parallel
Strand 3	H	86	91	anti-parallel
Strand 4	H	76	81	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	9	13	first strand
Strand 2	H	122	126	parallel
Strand 3	H	100	107	anti-parallel
Strand 4	H	38	44	anti-parallel
Strand 5	H	50	57	anti-parallel
Strand 6	H	64	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	9	13	first strand
Strand 2	H	122	126	parallel
Strand 3	H	100	107	anti-parallel
Strand 4	H	117	118	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	151	160	anti-parallel
Strand 3	H	191	199	anti-parallel
Strand 4	H	178	180	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	135	139	first strand
Strand 2	H	151	160	anti-parallel
Strand 3	H	191	199	anti-parallel
Strand 4	H	184	185	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	166	169	first strand
Strand 2	H	209	215	anti-parallel
Strand 3	H	220	226	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	7	first strand
Strand 2	L	19	25	anti-parallel
Strand 3	L	86	91	anti-parallel
Strand 4	L	76	83	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	14	first strand
Strand 2	L	122	127	parallel
Strand 3	L	100	106	anti-parallel
Strand 4	L	39	44	anti-parallel
Strand 5	L	51	55	anti-parallel
Strand 6	L	66	67	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	14	first strand
Strand 2	L	122	127	parallel
Strand 3	L	100	106	anti-parallel
Strand 4	L	117	118	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	30	31	first strand
Strand 2	L	36	37	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	134	138	first strand
Strand 2	L	149	159	anti-parallel
Strand 3	L	193	202	anti-parallel
Strand 4	L	179	183	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	173	175	first strand
Strand 2	L	165	170	anti-parallel
Strand 3	L	211	217	anti-parallel
Strand 4	L	225	230	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UZC

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZC