Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7UZP entry

There are 15 chains in PDB entry 7UZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 30LEU 130
B
 TYR 15PHE 23
B
 HIS 25LEU 27
B
 ALA 29GLU 30
B
 HIS 32ILE 36
C
 ASP 30LEU 130
D
 TYR 15PHE 23
D
 HIS 25LEU 27
D
 ALA 29GLU 30
D
 HIS 32ILE 36
E
 ASP 30LEU 130
F
 GLN 16PHE 23
F
 HIS 25LEU 27
F
 ALA 29GLU 30
F
 HIS 32ILE 36
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7UZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 58Right-handed alpha
Helix 2
AA2
B
16 32Right-handed alpha
Helix 3
AA3
C
33 58Right-handed alpha
Helix 4
AA4
D
16 32Right-handed alpha
Helix 5
AA5
E
33 58Right-handed alpha
Helix 6
AA6
E
123 127Right-handed 310
Helix 7
AA7
F
17 32Right-handed alpha
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There are 6 sheets in PDB entry 7UZP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
73 74anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 86first strand
Strand 2
A
99 104anti-parallel
Strand 3
A
121 122anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
67 68first strand
Strand 2
C
73 74anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
81 86first strand
Strand 2
C
99 104anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 68first strand
Strand 2
E
73 74anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
81 86first strand
Strand 2
E
99 104anti-parallel
Strand 3
E
121 122anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il