Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZT

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UZT entry

There are 3 chains in PDB entry 7UZT (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 420	ALA 646
B	SER 420	TYR 645
C	SER 420	TYR 645

There are 3 helices in PDB entry 7UZT. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	618	624	Right-handed alpha
Helix 2	AA2	B	618	623	Right-handed alpha
Helix 3	AA3	C	618	622	Right-handed 310

There are 9 sheets in PDB entry 7UZT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	466	469	first strand
Strand 2	A	459	463	anti-parallel
Strand 3	A	501	505	anti-parallel
Strand 4	A	508	517	anti-parallel
Strand 5	A	526	534	anti-parallel
Strand 6	A	586	593	anti-parallel
Strand 7	A	472	482	anti-parallel
Strand 8	A	430	436	anti-parallel
Strand 9	A	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	454	first strand
Strand 2	A	541	553	anti-parallel
Strand 3	A	564	578	anti-parallel
Strand 4	A	614	616	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	595	599	first strand
Strand 2	A	602	606	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	466	469	first strand
Strand 2	B	459	463	anti-parallel
Strand 3	B	501	505	anti-parallel
Strand 4	B	508	517	anti-parallel
Strand 5	B	526	534	anti-parallel
Strand 6	B	586	593	anti-parallel
Strand 7	B	472	482	anti-parallel
Strand 8	B	430	436	anti-parallel
Strand 9	B	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	451	454	first strand
Strand 2	B	541	553	anti-parallel
Strand 3	B	564	578	anti-parallel
Strand 4	B	612	616	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	595	599	first strand
Strand 2	B	602	606	anti-parallel

Back to list of sheets
Back to top of page

There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	466	469	first strand
Strand 2	C	459	463	anti-parallel
Strand 3	C	501	505	anti-parallel
Strand 4	C	508	517	anti-parallel
Strand 5	C	526	534	anti-parallel
Strand 6	C	586	593	anti-parallel
Strand 7	C	472	482	anti-parallel
Strand 8	C	430	436	anti-parallel
Strand 9	C	635	638	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	454	first strand
Strand 2	C	541	553	anti-parallel
Strand 3	C	564	578	anti-parallel
Strand 4	C	612	616	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	595	599	first strand
Strand 2	C	602	606	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UZT

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZT