Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7UZX entry

There are 9 chains in PDB entry 7UZX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 2	LYS 214
B	TYR 2	LYS 214
C	TYR 2	LYS 214
D	TYR 2	LYS 214
E	TYR 2	LYS 214
H	THR 5	VAL 304
F	MET 1	THR 612
G	A 1	A 31
L	A 7	A 11

There are 60 helices in PDB entry 7UZX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	47	63	Right-handed alpha
Helix 2	AA2	A	66	72	Right-handed alpha
Helix 3	AA3	A	76	84	Right-handed alpha
Helix 4	AA4	A	104	115	Right-handed alpha
Helix 5	AA5	A	161	178	Right-handed alpha
Helix 6	AA6	B	47	63	Right-handed alpha
Helix 7	AA7	B	77	83	Right-handed alpha
Helix 8	AA8	B	104	115	Right-handed alpha
Helix 9	AA9	B	158	160	Right-handed 310
Helix 10	AB1	B	161	178	Right-handed alpha
Helix 11	AB2	C	47	63	Right-handed alpha
Helix 12	AB3	C	66	72	Right-handed alpha
Helix 13	AB4	C	76	84	Right-handed alpha
Helix 14	AB5	C	104	115	Right-handed alpha
Helix 15	AB6	C	161	178	Right-handed alpha
Helix 16	AB7	C	184	188	Right-handed 310
Helix 17	AB8	D	47	63	Right-handed alpha
Helix 18	AB9	D	66	73	Right-handed alpha
Helix 19	AC1	D	76	84	Right-handed alpha
Helix 20	AC2	D	104	114	Right-handed alpha
Helix 21	AC3	D	161	178	Right-handed alpha
Helix 22	AC4	E	47	63	Right-handed alpha
Helix 23	AC5	E	66	73	Right-handed alpha
Helix 24	AC6	E	76	83	Right-handed alpha
Helix 25	AC7	E	104	115	Right-handed alpha
Helix 26	AC8	E	161	178	Right-handed alpha
Helix 27	AC9	H	31	47	Right-handed alpha
Helix 28	AD1	H	50	55	Right-handed alpha
Helix 29	AD2	H	89	93	Right-handed 310
Helix 30	AD3	H	100	106	Right-handed alpha
Helix 31	AD4	H	110	121	Right-handed alpha
Helix 32	AD5	H	168	183	Right-handed alpha
Helix 33	AD6	H	190	194	Right-handed 310
Helix 34	AD7	H	205	213	Right-handed alpha
Helix 35	AD8	H	228	236	Right-handed alpha
Helix 36	AD9	F	2	13	Right-handed alpha
Helix 37	AE1	F	16	23	Right-handed alpha
Helix 38	AE2	F	25	29	Right-handed 310
Helix 39	AE3	F	32	42	Right-handed alpha
Helix 40	AE4	F	49	58	Right-handed alpha
Helix 41	AE5	F	60	66	Right-handed alpha
Helix 42	AE6	F	74	87	Right-handed alpha
Helix 43	AE7	F	154	170	Right-handed alpha
Helix 44	AE8	F	177	190	Right-handed alpha
Helix 45	AE9	F	205	227	Right-handed alpha
Helix 46	AF1	F	231	237	Right-handed alpha
Helix 47	AF2	F	245	249	Right-handed 310
Helix 48	AF3	F	261	267	Right-handed alpha
Helix 49	AF4	F	279	300	Right-handed alpha
Helix 50	AF5	F	303	305	Right-handed 310
Helix 51	AF6	F	322	344	Right-handed alpha
Helix 52	AF7	F	358	363	Right-handed alpha
Helix 53	AF8	F	367	386	Right-handed alpha
Helix 54	AF9	F	389	397	Right-handed alpha
Helix 55	AG1	F	423	437	Right-handed alpha
Helix 56	AG2	F	462	472	Right-handed alpha
Helix 57	AG3	F	535	542	Right-handed alpha
Helix 58	AG4	F	550	567	Right-handed alpha
Helix 59	AG5	F	567	574	Right-handed alpha
Helix 60	AG6	F	595	612	Right-handed alpha

There are 21 sheets in PDB entry 7UZX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	45	46	first strand
Strand 2	A	96	103	anti-parallel
Strand 3	A	147	156	anti-parallel
Strand 4	A	3	15	anti-parallel
Strand 5	A	191	203	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	119	127	first strand
Strand 2	A	134	142	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	147	156	anti-parallel
Strand 3	B	102	103	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	98	first strand
Strand 2	B	147	156	anti-parallel
Strand 3	B	3	13	anti-parallel
Strand 4	B	192	203	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	119	127	first strand
Strand 2	B	134	142	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	46	first strand
Strand 2	C	101	103	anti-parallel
Strand 3	C	147	156	anti-parallel
Strand 4	C	96	98	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	45	46	first strand
Strand 2	C	101	103	anti-parallel
Strand 3	C	147	156	anti-parallel
Strand 4	C	3	13	anti-parallel
Strand 5	C	192	203	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	127	first strand
Strand 2	C	134	142	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	103	first strand
Strand 2	D	147	156	anti-parallel
Strand 3	D	3	13	anti-parallel
Strand 4	D	192	203	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	119	127	first strand
Strand 2	D	134	142	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	98	first strand
Strand 2	E	147	156	anti-parallel
Strand 3	E	3	13	anti-parallel
Strand 4	E	192	198	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	102	103	first strand
Strand 2	E	147	156	anti-parallel
Strand 3	E	3	13	anti-parallel
Strand 4	E	201	203	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	59	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	63	66	anti-parallel
Strand 4	H	69	73	anti-parallel
Strand 5	H	95	97	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	58	59	first strand
Strand 2	H	160	166	anti-parallel
Strand 3	H	7	11	anti-parallel
Strand 4	H	199	203	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	125	131	first strand
Strand 2	H	148	154	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	220	221	first strand
Strand 2	H	301	302	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	239	240	first strand
Strand 2	H	273	274	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	243	246	first strand
Strand 2	H	265	268	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	283	284	first strand
Strand 2	H	294	295	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	307	311	first strand
Strand 2	F	314	320	anti-parallel
Strand 3	F	252	258	anti-parallel
Strand 4	F	351	357	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	450	452	first strand
Strand 2	F	456	461	anti-parallel
Strand 3	F	441	445	anti-parallel
Strand 4	F	478	479	anti-parallel
Strand 5	F	491	492	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7UZX

Analysis of interatomic Contacts of Structural Units in PDB entry:
7UZX