Analysis of interatomic Contacts of Structural Units in PDB entry:
7V07


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V07 entry

There are 4 chains in PDB entry 7V07 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLY 78LEU 117
D
 GLY 78LEU 117
C
 PRO 371THR 894
E
 PRO 371THR 894
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 7V07. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
88 114Right-handed alpha
Helix 2
AA2
D
88 114Right-handed alpha
Helix 3
AA3
C
379 390Right-handed alpha
Helix 4
AA4
C
391 393Right-handed 310
Helix 5
AA5
C
394 399Right-handed alpha
Helix 6
AA6
C
402 432Right-handed alpha
Helix 7
AA7
C
436 455Right-handed alpha
Helix 8
AA8
C
465 482Right-handed alpha
Helix 9
AA9
C
485 507Right-handed alpha
Helix 10
AB1
C
508 516Right-handed 310
Helix 11
AB2
C
517 547Right-handed alpha
Helix 12
AB3
C
569 594Right-handed alpha
Helix 13
AB4
C
598 608Right-handed alpha
Helix 14
AB5
C
608 623Right-handed alpha
Helix 15
AB6
C
660 667Right-handed alpha
Helix 16
AB7
C
667 690Right-handed alpha
Helix 17
AB8
C
691 695Right-handed 310
Helix 18
AB9
C
703 719Right-handed alpha
Helix 19
AC1
C
727 738Right-handed alpha
Helix 20
AC2
C
760 773Right-handed alpha
Helix 21
AC3
C
776 781Right-handed alpha
Helix 22
AC4
C
784 799Right-handed alpha
Helix 23
AC5
C
803 813Right-handed alpha
Helix 24
AC6
C
822 827Right-handed alpha
Helix 25
AC7
C
829 853Right-handed alpha
Helix 26
AC8
C
855 857Right-handed 310
Helix 27
AC9
C
858 865Right-handed alpha
Helix 28
AD1
C
865 872Right-handed alpha
Helix 29
AD2
C
872 878Right-handed alpha
Helix 30
AD3
C
879 887Right-handed alpha
Helix 31
AD4
E
379 390Right-handed alpha
Helix 32
AD5
E
391 393Right-handed 310
Helix 33
AD6
E
394 399Right-handed alpha
Helix 34
AD7
E
402 432Right-handed alpha
Helix 35
AD8
E
436 455Right-handed alpha
Helix 36
AD9
E
465 483Right-handed alpha
Helix 37
AE1
E
485 507Right-handed alpha
Helix 38
AE2
E
508 516Right-handed 310
Helix 39
AE3
E
517 547Right-handed alpha
Helix 40
AE4
E
569 593Right-handed alpha
Helix 41
AE5
E
598 608Right-handed alpha
Helix 42
AE6
E
608 624Right-handed alpha
Helix 43
AE7
E
660 667Right-handed alpha
Helix 44
AE8
E
667 690Right-handed alpha
Helix 45
AE9
E
691 695Right-handed 310
Helix 46
AF1
E
703 719Right-handed alpha
Helix 47
AF2
E
727 738Right-handed alpha
Helix 48
AF3
E
760 772Right-handed alpha
Helix 49
AF4
E
773 775Right-handed 310
Helix 50
AF5
E
776 781Right-handed alpha
Helix 51
AF6
E
784 799Right-handed alpha
Helix 52
AF7
E
803 813Right-handed alpha
Helix 53
AF8
E
822 827Right-handed alpha
Helix 54
AF9
E
829 852Right-handed alpha
Helix 55
AG1
E
855 857Right-handed 310
Helix 56
AG2
E
858 865Right-handed alpha
Helix 57
AG3
E
865 872Right-handed alpha
Helix 58
AG4
E
873 878Right-handed alpha
Helix 59
AG5
E
879 887Right-handed alpha
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There are 4 sheets in PDB entry 7V07. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
462 463first strand
Strand 2
C
725 726anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
739 741first strand
Strand 2
C
753 756anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
462 463first strand
Strand 2
E
725 726anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
739 741first strand
Strand 2
E
753 756anti-parallel
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