Analysis of interatomic Contacts of Structural Units in PDB entry:
7V0E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V0E entry

There are 8 chains in PDB entry 7V0E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 571	GLU 853
B	ALA 569	GLU 853
C	ALA 570	GLU 853
D	ALA 569	GLU 853
E	ALA 569	GLU 853
F	ALA 570	GLU 853
G	ALA 569	GLU 853
H	ARG 571	GLU 853

There are110 helices in PDB entry 7V0E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	585	595	Right-handed alpha
Helix 2	AA2	A	607	618	Right-handed alpha
Helix 3	AA3	A	627	631	Right-handed 310
Helix 4	AA4	A	632	640	Right-handed alpha
Helix 5	AA5	A	666	670	Right-handed 310
Helix 6	AA6	A	671	683	Right-handed alpha
Helix 7	AA7	A	703	715	Right-handed alpha
Helix 8	AA8	A	724	726	Right-handed 310
Helix 9	AA9	A	755	759	Right-handed 310
Helix 10	AB1	A	777	781	Right-handed 310
Helix 11	AB2	A	801	809	Right-handed alpha
Helix 12	AB3	A	822	832	Right-handed alpha
Helix 13	AB4	A	835	844	Right-handed alpha
Helix 14	AB5	A	845	849	Right-handed 310
Helix 15	AB6	B	585	594	Right-handed alpha
Helix 16	AB7	B	607	618	Right-handed alpha
Helix 17	AB8	B	627	631	Right-handed 310
Helix 18	AB9	B	632	640	Right-handed alpha
Helix 19	AC1	B	666	669	Right-handed 310
Helix 20	AC2	B	670	683	Right-handed alpha
Helix 21	AC3	B	703	715	Right-handed alpha
Helix 22	AC4	B	724	726	Right-handed 310
Helix 23	AC5	B	755	759	Right-handed 310
Helix 24	AC6	B	777	781	Right-handed 310
Helix 25	AC7	B	801	809	Right-handed alpha
Helix 26	AC8	B	822	832	Right-handed alpha
Helix 27	AC9	B	835	844	Right-handed alpha
Helix 28	AD1	B	845	849	Right-handed 310
Helix 29	AD2	C	585	595	Right-handed alpha
Helix 30	AD3	C	607	618	Right-handed alpha
Helix 31	AD4	C	627	631	Right-handed 310
Helix 32	AD5	C	632	640	Right-handed alpha
Helix 33	AD6	C	666	669	Right-handed 310
Helix 34	AD7	C	670	683	Right-handed alpha
Helix 35	AD8	C	703	715	Right-handed alpha
Helix 36	AD9	C	724	726	Right-handed 310
Helix 37	AE1	C	755	760	Right-handed 310
Helix 38	AE2	C	773	777	Right-handed alpha
Helix 39	AE3	C	777	783	Right-handed alpha
Helix 40	AE4	C	801	809	Right-handed alpha
Helix 41	AE5	C	822	832	Right-handed alpha
Helix 42	AE6	C	835	844	Right-handed alpha
Helix 43	AE7	C	845	849	Right-handed 310
Helix 44	AE8	D	585	595	Right-handed alpha
Helix 45	AE9	D	607	618	Right-handed alpha
Helix 46	AF1	D	627	631	Right-handed 310
Helix 47	AF2	D	632	640	Right-handed alpha
Helix 48	AF3	D	668	670	Right-handed 310
Helix 49	AF4	D	671	683	Right-handed alpha
Helix 50	AF5	D	703	715	Right-handed alpha
Helix 51	AF6	D	724	726	Right-handed 310
Helix 52	AF7	D	755	760	Right-handed alpha
Helix 53	AF8	D	777	782	Right-handed 310
Helix 54	AF9	D	801	809	Right-handed alpha
Helix 55	AG1	D	822	832	Right-handed alpha
Helix 56	AG2	D	835	844	Right-handed alpha
Helix 57	AG3	D	845	849	Right-handed 310
Helix 58	AG4	E	585	595	Right-handed alpha
Helix 59	AG5	E	607	618	Right-handed alpha
Helix 60	AG6	E	627	631	Right-handed 310
Helix 61	AG7	E	632	640	Right-handed alpha
Helix 62	AG8	E	666	669	Right-handed 310
Helix 63	AG9	E	670	683	Right-handed alpha
Helix 64	AH1	E	703	715	Right-handed alpha
Helix 65	AH2	E	724	726	Right-handed 310
Helix 66	AH3	E	755	760	Right-handed 310
Helix 67	AH4	E	801	809	Right-handed alpha
Helix 68	AH5	E	822	833	Right-handed alpha
Helix 69	AH6	E	835	844	Right-handed alpha
Helix 70	AH7	E	845	849	Right-handed 310
Helix 71	AH8	F	585	595	Right-handed alpha
Helix 72	AH9	F	607	617	Right-handed alpha
Helix 73	AI1	F	627	631	Right-handed 310
Helix 74	AI2	F	632	640	Right-handed alpha
Helix 75	AI3	F	666	669	Right-handed 310
Helix 76	AI4	F	670	683	Right-handed alpha
Helix 77	AI5	F	703	715	Right-handed alpha
Helix 78	AI6	F	724	726	Right-handed 310
Helix 79	AI7	F	755	760	Right-handed 310
Helix 80	AI8	F	801	809	Right-handed alpha
Helix 81	AI9	F	822	832	Right-handed alpha
Helix 82	AJ1	F	835	844	Right-handed alpha
Helix 83	AJ2	F	845	849	Right-handed 310
Helix 84	AJ3	G	585	594	Right-handed alpha
Helix 85	AJ4	G	607	618	Right-handed alpha
Helix 86	AJ5	G	627	631	Right-handed 310
Helix 87	AJ6	G	632	640	Right-handed alpha
Helix 88	AJ7	G	666	670	Right-handed 310
Helix 89	AJ8	G	671	683	Right-handed alpha
Helix 90	AJ9	G	703	715	Right-handed alpha
Helix 91	AK1	G	724	726	Right-handed 310
Helix 92	AK2	G	755	760	Right-handed alpha
Helix 93	AK3	G	777	781	Right-handed 310
Helix 94	AK4	G	801	809	Right-handed alpha
Helix 95	AK5	G	822	832	Right-handed alpha
Helix 96	AK6	G	835	844	Right-handed alpha
Helix 97	AK7	G	845	849	Right-handed 310
Helix 98	AK8	H	585	595	Right-handed alpha
Helix 99	AK9	H	607	618	Right-handed alpha
Helix 100	AL1	H	627	631	Right-handed 310
Helix 101	AL2	H	632	640	Right-handed alpha
Helix 102	AL3	H	666	670	Right-handed 310
Helix 103	AL4	H	671	683	Right-handed alpha
Helix 104	AL5	H	703	715	Right-handed alpha
Helix 105	AL6	H	724	726	Right-handed 310
Helix 106	AL7	H	755	760	Right-handed 310
Helix 107	AL8	H	801	809	Right-handed alpha
Helix 108	AL9	H	822	833	Right-handed alpha
Helix 109	AM1	H	835	844	Right-handed alpha
Helix 110	AM2	H	845	849	Right-handed 310

There are 17 sheets in PDB entry 7V0E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	622	624	first strand
Strand 2	A	598	604	parallel
Strand 3	A	575	580	parallel
Strand 4	A	644	648	parallel
Strand 5	A	693	699	parallel
Strand 6	A	732	737	anti-parallel
Strand 7	A	719	722	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	765	766	first strand
Strand 2	A	791	793	anti-parallel
Strand 3	A	796	798	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	622	624	first strand
Strand 2	B	598	604	parallel
Strand 3	B	575	580	parallel
Strand 4	B	644	648	parallel
Strand 5	B	693	699	parallel
Strand 6	B	732	737	anti-parallel
Strand 7	B	719	722	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	765	766	first strand
Strand 2	B	791	793	anti-parallel
Strand 3	B	796	798	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	622	624	first strand
Strand 2	C	598	604	parallel
Strand 3	C	575	580	parallel
Strand 4	C	644	648	parallel
Strand 5	C	693	699	parallel
Strand 6	C	732	737	anti-parallel
Strand 7	C	719	722	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	729	730	first strand
Strand 2	C	771	772	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	765	766	first strand
Strand 2	C	791	793	anti-parallel
Strand 3	C	796	798	anti-parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	622	624	first strand
Strand 2	D	598	604	parallel
Strand 3	D	575	580	parallel
Strand 4	D	644	648	parallel
Strand 5	D	693	699	parallel
Strand 6	D	732	737	anti-parallel
Strand 7	D	719	722	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	765	766	first strand
Strand 2	D	791	793	anti-parallel
Strand 3	D	796	798	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	623	624	first strand
Strand 2	E	598	604	parallel
Strand 3	E	575	580	parallel
Strand 4	E	644	648	parallel
Strand 5	E	693	699	parallel
Strand 6	E	732	737	anti-parallel
Strand 7	E	719	722	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	765	766	first strand
Strand 2	E	791	793	anti-parallel
Strand 3	E	796	798	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	622	624	first strand
Strand 2	F	598	604	parallel
Strand 3	F	575	580	parallel
Strand 4	F	644	648	parallel
Strand 5	F	693	699	parallel
Strand 6	F	732	737	anti-parallel
Strand 7	F	719	722	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	764	766	first strand
Strand 2	F	791	793	anti-parallel
Strand 3	F	796	798	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	623	624	first strand
Strand 2	G	598	604	parallel
Strand 3	G	575	580	parallel
Strand 4	G	644	648	parallel
Strand 5	G	693	699	parallel
Strand 6	G	732	737	anti-parallel
Strand 7	G	719	722	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	765	766	first strand
Strand 2	G	791	793	anti-parallel
Strand 3	G	796	798	anti-parallel

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There are 7 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	622	624	first strand
Strand 2	H	598	604	parallel
Strand 3	H	575	580	parallel
Strand 4	H	644	648	parallel
Strand 5	H	693	699	parallel
Strand 6	H	732	737	anti-parallel
Strand 7	H	719	722	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	765	766	first strand
Strand 2	H	791	793	anti-parallel
Strand 3	H	796	798	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V0E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V0E