Analysis of interatomic Contacts of Structural Units in PDB entry:
7V0S

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V0S entry

There are 4 chains in PDB entry 7V0S (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
K	SER 2	PHE 417
L	MET 1	ARG 409
Q	MET 1	ARG 409
J	ASP 11	GLY 167

There are 66 helices in PDB entry 7V0S. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	K	11	31	Right-handed alpha
Helix 2	AA2	K	43	60	Right-handed alpha
Helix 3	AA3	K	60	66	Right-handed alpha
Helix 4	AA4	K	72	98	Right-handed alpha
Helix 5	AA5	K	109	127	Right-handed alpha
Helix 6	AA6	K	128	130	Right-handed 310
Helix 7	AA7	K	135	161	Right-handed alpha
Helix 8	AA8	K	166	170	Right-handed 310
Helix 9	AA9	K	171	187	Right-handed alpha
Helix 10	AB1	K	202	224	Right-handed alpha
Helix 11	AB2	K	230	256	Right-handed alpha
Helix 12	AB3	K	266	274	Right-handed alpha
Helix 13	AB4	K	275	281	Right-handed alpha
Helix 14	AB5	K	290	312	Right-handed alpha
Helix 15	AB6	K	326	350	Right-handed alpha
Helix 16	AB7	K	361	389	Right-handed alpha
Helix 17	AB8	K	390	394	Right-handed 310
Helix 18	AB9	K	397	401	Right-handed 310
Helix 19	AC1	K	403	407	Right-handed 310
Helix 20	AC2	L	3	23	Right-handed alpha
Helix 21	AC3	L	50	63	Right-handed alpha
Helix 22	AC4	L	63	69	Right-handed alpha
Helix 23	AC5	L	75	104	Right-handed alpha
Helix 24	AC6	L	111	133	Right-handed alpha
Helix 25	AC7	L	137	162	Right-handed alpha
Helix 26	AC8	L	174	189	Right-handed alpha
Helix 27	AC9	L	191	195	Right-handed 310
Helix 28	AD1	L	204	226	Right-handed alpha
Helix 29	AD2	L	233	262	Right-handed alpha
Helix 30	AD3	L	263	266	Right-handed 310
Helix 31	AD4	L	268	275	Right-handed alpha
Helix 32	AD5	L	277	283	Right-handed alpha
Helix 33	AD6	L	291	321	Right-handed alpha
Helix 34	AD7	L	329	334	Right-handed alpha
Helix 35	AD8	L	334	351	Right-handed alpha
Helix 36	AD9	L	357	384	Right-handed alpha
Helix 37	AE1	L	398	402	Right-handed 310
Helix 38	AE2	Q	3	23	Right-handed alpha
Helix 39	AE3	Q	47	63	Right-handed alpha
Helix 40	AE4	Q	63	69	Right-handed alpha
Helix 41	AE5	Q	75	104	Right-handed alpha
Helix 42	AE6	Q	111	132	Right-handed alpha
Helix 43	AE7	Q	137	162	Right-handed alpha
Helix 44	AE8	Q	174	189	Right-handed alpha
Helix 45	AE9	Q	191	195	Right-handed 310
Helix 46	AF1	Q	204	228	Right-handed alpha
Helix 47	AF2	Q	233	262	Right-handed alpha
Helix 48	AF3	Q	263	266	Right-handed 310
Helix 49	AF4	Q	268	275	Right-handed alpha
Helix 50	AF5	Q	277	283	Right-handed alpha
Helix 51	AF6	Q	292	313	Right-handed alpha
Helix 52	AF7	Q	313	321	Right-handed alpha
Helix 53	AF8	Q	329	334	Right-handed alpha
Helix 54	AF9	Q	334	352	Right-handed alpha
Helix 55	AG1	Q	357	384	Right-handed alpha
Helix 56	AG2	Q	398	402	Right-handed 310
Helix 57	AG3	J	12	23	Right-handed alpha
Helix 58	AG4	J	24	35	Right-handed alpha
Helix 59	AG5	J	47	56	Right-handed alpha
Helix 60	AG6	J	57	67	Right-handed alpha
Helix 61	AG7	J	80	89	Right-handed alpha
Helix 62	AG8	J	90	100	Right-handed alpha
Helix 63	AG9	J	113	121	Right-handed alpha
Helix 64	AH1	J	123	133	Right-handed alpha
Helix 65	AH2	J	146	155	Right-handed alpha
Helix 66	AH3	J	156	167	Right-handed alpha

There are 3 sheets in PDB entry 7V0S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	32	33	first strand
Strand 2	K	106	107	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	24	25	first strand
Strand 2	L	108	109	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	Q	24	25	first strand
Strand 2	Q	108	109	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V0S

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V0S