Analysis of interatomic Contacts of Structural Units in PDB entry:
7V18


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V18 entry

There is 1 chain in PDB entry 7V18 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 388GLN 623
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 7V18. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
429 434Right-handed 310
Helix 2
AA2
A
438 440Right-handed 310
Helix 3
AA3
A
450 454Right-handed 310
Helix 4
AA4
A
474 478Right-handed 310
Helix 5
AA5
A
541 549Right-handed alpha
Helix 6
AA6
A
614 622Right-handed alpha
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There are 2 sheets in PDB entry 7V18. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 393first strand
Strand 2
A
533 536anti-parallel
Strand 3
A
514 518anti-parallel
Strand 4
A
578 583anti-parallel
Strand 5
A
586 595anti-parallel
Strand 6
A
606 610anti-parallel
Strand 7
A
558 561anti-parallel
Strand 8
A
539 540anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 446first strand
Strand 2
A
402 408anti-parallel
Strand 3
A
412 422anti-parallel
Strand 4
A
425 428anti-parallel
Strand 5
A
482 486anti-parallel
Strand 6
A
463 468anti-parallel
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