Analysis of interatomic Contacts of Structural Units in PDB entry:
7V1N

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V1N entry

There are 2 chains in PDB entry 7V1N (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	GLU 2367
K	GLU 120	GLY 178

There are 49 helices in PDB entry 7V1N. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	5	13	Right-handed alpha
Helix 2	AA2	A	26	31	Right-handed alpha
Helix 3	AA3	A	48	53	Right-handed alpha
Helix 4	AA4	A	53	63	Right-handed alpha
Helix 5	AA5	A	108	122	Right-handed alpha
Helix 6	AA6	A	137	154	Right-handed alpha
Helix 7	AA7	A	154	159	Right-handed alpha
Helix 8	AA8	A	167	171	Right-handed 310
Helix 9	AA9	A	175	197	Right-handed alpha
Helix 10	AB1	A	201	215	Right-handed alpha
Helix 11	AB2	A	219	227	Right-handed alpha
Helix 12	AB3	A	256	261	Right-handed alpha
Helix 13	AB4	A	264	280	Right-handed alpha
Helix 14	AB5	A	309	325	Right-handed alpha
Helix 15	AB6	A	340	345	Right-handed alpha
Helix 16	AB7	A	345	353	Right-handed alpha
Helix 17	AB8	A	356	361	Right-handed alpha
Helix 18	AB9	A	395	421	Right-handed alpha
Helix 19	AC1	A	424	438	Right-handed alpha
Helix 20	AC2	A	444	449	Right-handed alpha
Helix 21	AC3	A	453	457	Right-handed 310
Helix 22	AC4	A	465	470	Right-handed alpha
Helix 23	AC5	A	471	484	Right-handed alpha
Helix 24	AC6	A	514	519	Right-handed alpha
Helix 25	AC7	A	524	538	Right-handed alpha
Helix 26	AC8	A	588	601	Right-handed alpha
Helix 27	AC9	A	668	682	Right-handed alpha
Helix 28	AD1	A	683	686	Right-handed 310
Helix 29	AD2	A	711	721	Right-handed alpha
Helix 30	AD3	A	724	728	Right-handed 310
Helix 31	AD4	A	765	775	Right-handed alpha
Helix 32	AD5	A	794	810	Right-handed alpha
Helix 33	AD6	A	817	839	Right-handed alpha
Helix 34	AD7	A	850	863	Right-handed alpha
Helix 35	AD8	A	870	874	Right-handed 310
Helix 36	AD9	A	917	936	Right-handed alpha
Helix 37	AE1	A	982	991	Right-handed alpha
Helix 38	AE2	A	1117	1134	Right-handed alpha
Helix 39	AE3	A	1246	1259	Right-handed alpha
Helix 40	AE4	A	1306	1312	Right-handed alpha
Helix 41	AE5	A	1349	1354	Right-handed alpha
Helix 42	AE6	A	1433	1451	Right-handed alpha
Helix 43	AE7	A	1561	1572	Right-handed alpha
Helix 44	AE8	A	1580	1589	Right-handed alpha
Helix 45	AE9	A	1678	1682	Right-handed 310
Helix 46	AF1	A	1793	1799	Right-handed alpha
Helix 47	AF2	A	1838	1842	Right-handed 310
Helix 48	AF3	A	1868	1872	Right-handed 310
Helix 49	AF4	K	168	176	Right-handed alpha

There are 41 sheets in PDB entry 7V1N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	92	93	first strand
Strand 2	A	368	369	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	97	101	first strand
Strand 2	A	126	131	parallel
Strand 3	A	237	239	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	282	285	first strand
Strand 2	A	383	390	anti-parallel
Strand 3	A	375	378	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	609	610	first strand
Strand 2	A	583	584	parallel
Strand 3	A	651	652	parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	647	first strand
Strand 2	A	691	693	parallel
Strand 3	A	736	737	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	696	697	first strand
Strand 2	A	740	741	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	745	747	first strand
Strand 2	A	753	756	anti-parallel
Strand 3	A	762	763	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	778	781	first strand
Strand 2	A	788	791	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1162	1163	first strand
Strand 2	A	1155	1157	anti-parallel
Strand 3	A	1289	1291	parallel
Strand 4	A	1314	1318	parallel
Strand 5	A	1334	1338	parallel
Strand 6	A	1391	1393	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1168	1170	first strand
Strand 2	A	1229	1237	parallel
Strand 3	A	1274	1281	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1172	1173	first strand
Strand 2	A	1193	1194	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1323	1327	first strand
Strand 2	A	1344	1348	parallel
Strand 3	A	1403	1408	parallel
Strand 4	A	1413	1420	anti-parallel
Strand 5	A	1425	1427	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1323	1327	first strand
Strand 2	A	1344	1348	parallel
Strand 3	A	1403	1408	parallel
Strand 4	A	1413	1420	anti-parallel
Strand 5	A	1430	1432	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1356	1359	first strand
Strand 2	A	1362	1365	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1376	1378	first strand
Strand 2	A	1383	1385	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1460	1464	first strand
Strand 2	A	1473	1477	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1486	1489	first strand
Strand 2	A	1492	1496	anti-parallel
Strand 3	A	1508	1511	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1542	1545	first strand
Strand 2	A	1550	1557	anti-parallel
Strand 3	A	1604	1606	parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1542	1545	first strand
Strand 2	A	1550	1557	anti-parallel
Strand 3	A	1612	1614	parallel
Strand 4	A	1621	1625	anti-parallel
Strand 5	A	1633	1638	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1644	1647	first strand
Strand 2	A	1655	1660	anti-parallel
Strand 3	A	1691	1694	parallel
Strand 4	A	1717	1720	parallel
Strand 5	A	1765	1769	parallel
Strand 6	A	1749	1754	anti-parallel
Strand 7	A	1741	1746	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1702	1705	first strand
Strand 2	A	1730	1734	parallel
Strand 3	A	1781	1784	parallel
Strand 4	A	1791	1792	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1815	1819	first strand
Strand 2	A	1822	1826	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1835	1837	first strand
Strand 2	A	1844	1846	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1857	1860	first strand
Strand 2	A	1863	1866	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1878	1882	first strand
Strand 2	A	1885	1889	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1898	1900	first strand
Strand 2	A	1907	1910	anti-parallel
Strand 3	A	1922	1923	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1928	1932	first strand
Strand 2	A	1935	1939	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1951	1952	first strand
Strand 2	A	1955	1956	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1969	1972	first strand
Strand 2	A	1977	1980	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2011	2013	first strand
Strand 2	A	2016	2018	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2030	2032	first strand
Strand 2	A	2037	2041	anti-parallel
Strand 3	A	2053	2054	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2059	2063	first strand
Strand 2	A	2066	2070	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2081	2083	first strand
Strand 2	A	2086	2089	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2152	2153	first strand
Strand 2	A	2157	2158	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2171	2172	first strand
Strand 2	A	2186	2187	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2235	2239	first strand
Strand 2	A	2242	2246	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2257	2258	first strand
Strand 2	A	2263	2264	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2295	2299	first strand
Strand 2	A	2302	2307	anti-parallel
Strand 3	A	2319	2320	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2327	2328	first strand
Strand 2	A	2333	2334	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2346	2349	first strand
Strand 2	A	2352	2355	anti-parallel

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There are 2 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	138	144	first strand
Strand 2	K	149	155	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V1N

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V1N