Analysis of interatomic Contacts of Structural Units in PDB entry:
7V1O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V1O entry

There are 2 chains in PDB entry 7V1O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3ILE 290
B
 ASP 5ILE 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 7V1O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 28Right-handed alpha
Helix 2
AA2
A
48 61Right-handed alpha
Helix 3
AA3
A
61 66Right-handed alpha
Helix 4
AA4
A
72 76Right-handed 310
Helix 5
AA5
A
88 92Right-handed 310
Helix 6
AA6
A
103 107Right-handed 310
Helix 7
AA7
A
108 114Right-handed 310
Helix 8
AA8
A
124 139Right-handed alpha
Helix 9
AA9
A
147 157Right-handed alpha
Helix 10
AB1
A
164 174Right-handed alpha
Helix 11
AB2
A
175 179Right-handed 310
Helix 12
AB3
A
186 192Right-handed alpha
Helix 13
AB4
A
192 204Right-handed alpha
Helix 14
AB5
A
209 221Right-handed alpha
Helix 15
AB6
A
221 227Right-handed alpha
Helix 16
AB7
A
233 240Right-handed alpha
Helix 17
AB8
A
257 262Right-handed 310
Helix 18
AB9
A
264 280Right-handed alpha
Helix 19
AC1
B
22 28Right-handed alpha
Helix 20
AC2
B
48 61Right-handed alpha
Helix 21
AC3
B
61 66Right-handed alpha
Helix 22
AC4
B
72 76Right-handed 310
Helix 23
AC5
B
103 107Right-handed 310
Helix 24
AC6
B
108 113Right-handed alpha
Helix 25
AC7
B
124 139Right-handed alpha
Helix 26
AC8
B
147 157Right-handed alpha
Helix 27
AC9
B
164 174Right-handed alpha
Helix 28
AD1
B
175 179Right-handed 310
Helix 29
AD2
B
186 192Right-handed alpha
Helix 30
AD3
B
192 204Right-handed alpha
Helix 31
AD4
B
209 221Right-handed alpha
Helix 32
AD5
B
221 227Right-handed alpha
Helix 33
AD6
B
228 233Right-handed alpha
Helix 34
AD7
B
233 240Right-handed alpha
Helix 35
AD8
B
257 262Right-handed 310
Helix 36
AD9
B
264 279Right-handed alpha
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There are 4 sheets in PDB entry 7V1O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 11first strand
Strand 2
A
14 17anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 100first strand
Strand 2
A
39 43parallel
Strand 3
A
117 122parallel
Strand 4
A
180 185parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 11first strand
Strand 2
B
14 17anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
97 100first strand
Strand 2
B
39 43parallel
Strand 3
B
117 122parallel
Strand 4
B
180 185parallel
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