Analysis of interatomic Contacts of Structural Units in PDB entry:
7V1W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V1W entry

There are 6 chains in PDB entry 7V1W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 3	GLU 449
B	GLU 3	GLU 449
C	GLU 3	GLU 449
D	GLU 3	GLU 449
E	GLU 3	GLU 449
F	GLU 3	GLU 449

There are 66 helices in PDB entry 7V1W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	8	13	Right-handed 310
Helix 2	AA2	A	73	78	Right-handed alpha
Helix 3	AA3	A	87	91	Right-handed 310
Helix 4	AA4	A	100	104	Right-handed alpha
Helix 5	AA5	A	123	127	Right-handed alpha
Helix 6	AA6	A	227	232	Right-handed alpha
Helix 7	AA7	A	289	294	Right-handed alpha
Helix 8	AA8	A	313	317	Right-handed 310
Helix 9	AA9	A	345	349	Right-handed 310
Helix 10	AB1	A	374	378	Right-handed 310
Helix 11	AB2	A	396	449	Right-handed alpha
Helix 12	AB3	B	8	13	Right-handed 310
Helix 13	AB4	B	73	78	Right-handed alpha
Helix 14	AB5	B	87	91	Right-handed 310
Helix 15	AB6	B	100	104	Right-handed alpha
Helix 16	AB7	B	123	127	Right-handed alpha
Helix 17	AB8	B	227	232	Right-handed alpha
Helix 18	AB9	B	289	294	Right-handed alpha
Helix 19	AC1	B	313	317	Right-handed 310
Helix 20	AC2	B	345	349	Right-handed 310
Helix 21	AC3	B	374	378	Right-handed 310
Helix 22	AC4	B	396	449	Right-handed alpha
Helix 23	AC5	C	8	13	Right-handed 310
Helix 24	AC6	C	73	78	Right-handed alpha
Helix 25	AC7	C	87	91	Right-handed 310
Helix 26	AC8	C	100	104	Right-handed alpha
Helix 27	AC9	C	123	127	Right-handed alpha
Helix 28	AD1	C	227	232	Right-handed alpha
Helix 29	AD2	C	289	294	Right-handed alpha
Helix 30	AD3	C	313	317	Right-handed 310
Helix 31	AD4	C	345	349	Right-handed 310
Helix 32	AD5	C	374	378	Right-handed 310
Helix 33	AD6	C	396	449	Right-handed alpha
Helix 34	AD7	D	8	13	Right-handed 310
Helix 35	AD8	D	73	78	Right-handed alpha
Helix 36	AD9	D	87	91	Right-handed 310
Helix 37	AE1	D	100	104	Right-handed alpha
Helix 38	AE2	D	123	127	Right-handed alpha
Helix 39	AE3	D	227	232	Right-handed alpha
Helix 40	AE4	D	289	294	Right-handed alpha
Helix 41	AE5	D	313	317	Right-handed 310
Helix 42	AE6	D	345	349	Right-handed 310
Helix 43	AE7	D	374	378	Right-handed 310
Helix 44	AE8	D	396	449	Right-handed alpha
Helix 45	AE9	E	8	13	Right-handed 310
Helix 46	AF1	E	73	78	Right-handed alpha
Helix 47	AF2	E	87	91	Right-handed 310
Helix 48	AF3	E	100	104	Right-handed alpha
Helix 49	AF4	E	123	127	Right-handed alpha
Helix 50	AF5	E	227	232	Right-handed alpha
Helix 51	AF6	E	289	294	Right-handed alpha
Helix 52	AF7	E	313	317	Right-handed 310
Helix 53	AF8	E	345	349	Right-handed 310
Helix 54	AF9	E	374	378	Right-handed 310
Helix 55	AG1	E	396	449	Right-handed alpha
Helix 56	AG2	F	8	13	Right-handed 310
Helix 57	AG3	F	73	78	Right-handed alpha
Helix 58	AG4	F	87	91	Right-handed 310
Helix 59	AG5	F	100	104	Right-handed alpha
Helix 60	AG6	F	123	127	Right-handed alpha
Helix 61	AG7	F	227	232	Right-handed alpha
Helix 62	AG8	F	289	294	Right-handed alpha
Helix 63	AG9	F	313	317	Right-handed 310
Helix 64	AH1	F	345	349	Right-handed 310
Helix 65	AH2	F	374	378	Right-handed 310
Helix 66	AH3	F	396	448	Right-handed alpha

There are 36 sheets in PDB entry 7V1W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	18	23	first strand
Strand 2	A	184	194	anti-parallel
Strand 3	A	52	62	anti-parallel
Strand 4	A	159	162	anti-parallel
Strand 5	A	142	145	anti-parallel
Strand 6	A	137	138	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	184	194	anti-parallel
Strand 3	A	52	62	anti-parallel
Strand 4	A	166	168	anti-parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	49	first strand
Strand 2	A	171	178	anti-parallel
Strand 3	A	105	111	anti-parallel
Strand 4	A	119	122	anti-parallel
Strand 5	A	205	213	parallel
Strand 6	A	353	362	anti-parallel
Strand 7	A	251	261	anti-parallel
Strand 8	A	320	326	anti-parallel
Strand 9	A	308	312	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	41	49	first strand
Strand 2	A	171	178	anti-parallel
Strand 3	A	105	111	anti-parallel
Strand 4	A	119	122	anti-parallel
Strand 5	A	205	213	parallel
Strand 6	A	353	362	anti-parallel
Strand 7	A	251	261	anti-parallel
Strand 8	A	332	334	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	64	68	first strand
Strand 2	A	94	97	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	248	first strand
Strand 2	A	337	342	anti-parallel
Strand 3	A	273	277	anti-parallel
Strand 4	A	285	286	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	23	first strand
Strand 2	B	184	194	anti-parallel
Strand 3	B	52	62	anti-parallel
Strand 4	B	159	162	anti-parallel
Strand 5	B	142	145	anti-parallel
Strand 6	B	137	138	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	184	194	anti-parallel
Strand 3	B	52	62	anti-parallel
Strand 4	B	166	168	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	49	first strand
Strand 2	B	171	178	anti-parallel
Strand 3	B	105	111	anti-parallel
Strand 4	B	119	122	anti-parallel
Strand 5	B	205	213	parallel
Strand 6	B	353	362	anti-parallel
Strand 7	B	251	261	anti-parallel
Strand 8	B	320	326	anti-parallel
Strand 9	B	308	312	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	41	49	first strand
Strand 2	B	171	178	anti-parallel
Strand 3	B	105	111	anti-parallel
Strand 4	B	119	122	anti-parallel
Strand 5	B	205	213	parallel
Strand 6	B	353	362	anti-parallel
Strand 7	B	251	261	anti-parallel
Strand 8	B	332	334	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	64	68	first strand
Strand 2	B	94	97	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	248	first strand
Strand 2	B	337	342	anti-parallel
Strand 3	B	273	277	anti-parallel
Strand 4	B	285	286	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	18	23	first strand
Strand 2	C	184	194	anti-parallel
Strand 3	C	52	62	anti-parallel
Strand 4	C	159	162	anti-parallel
Strand 5	C	142	145	anti-parallel
Strand 6	C	137	138	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	184	194	anti-parallel
Strand 3	C	52	62	anti-parallel
Strand 4	C	166	168	anti-parallel

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There are 10 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	49	first strand
Strand 2	C	171	178	anti-parallel
Strand 3	C	105	111	anti-parallel
Strand 4	C	119	122	anti-parallel
Strand 5	C	205	213	parallel
Strand 6	C	353	362	anti-parallel
Strand 7	C	251	261	anti-parallel
Strand 8	C	320	326	anti-parallel
Strand 9	C	308	312	anti-parallel
Strand 10	C	304	305	anti-parallel

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There are 8 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	49	first strand
Strand 2	C	171	178	anti-parallel
Strand 3	C	105	111	anti-parallel
Strand 4	C	119	122	anti-parallel
Strand 5	C	205	213	parallel
Strand 6	C	353	362	anti-parallel
Strand 7	C	251	261	anti-parallel
Strand 8	C	332	334	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	64	68	first strand
Strand 2	C	94	97	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	248	first strand
Strand 2	C	337	342	anti-parallel
Strand 3	C	273	277	anti-parallel
Strand 4	C	285	286	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	23	first strand
Strand 2	D	184	194	anti-parallel
Strand 3	D	52	62	anti-parallel
Strand 4	D	159	162	anti-parallel
Strand 5	D	142	145	anti-parallel
Strand 6	D	137	138	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	184	194	anti-parallel
Strand 3	D	52	62	anti-parallel
Strand 4	D	166	168	anti-parallel

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There are 9 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	49	first strand
Strand 2	D	171	178	anti-parallel
Strand 3	D	105	111	anti-parallel
Strand 4	D	119	122	anti-parallel
Strand 5	D	205	213	parallel
Strand 6	D	353	362	anti-parallel
Strand 7	D	251	261	anti-parallel
Strand 8	D	320	326	anti-parallel
Strand 9	D	308	312	anti-parallel

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There are 8 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	41	49	first strand
Strand 2	D	171	178	anti-parallel
Strand 3	D	105	111	anti-parallel
Strand 4	D	119	122	anti-parallel
Strand 5	D	205	213	parallel
Strand 6	D	353	362	anti-parallel
Strand 7	D	251	261	anti-parallel
Strand 8	D	332	334	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	64	68	first strand
Strand 2	D	94	97	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	242	248	first strand
Strand 2	D	337	342	anti-parallel
Strand 3	D	273	277	anti-parallel
Strand 4	D	285	286	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	18	23	first strand
Strand 2	E	184	194	anti-parallel
Strand 3	E	52	62	anti-parallel
Strand 4	E	159	162	anti-parallel
Strand 5	E	142	145	anti-parallel
Strand 6	E	137	138	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	184	194	anti-parallel
Strand 3	E	52	62	anti-parallel
Strand 4	E	166	168	anti-parallel

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There are 10 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	49	first strand
Strand 2	E	171	178	anti-parallel
Strand 3	E	105	111	anti-parallel
Strand 4	E	119	122	anti-parallel
Strand 5	E	205	213	parallel
Strand 6	E	353	362	anti-parallel
Strand 7	E	251	261	anti-parallel
Strand 8	E	320	326	anti-parallel
Strand 9	E	308	312	anti-parallel
Strand 10	E	304	305	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	41	49	first strand
Strand 2	E	171	178	anti-parallel
Strand 3	E	105	111	anti-parallel
Strand 4	E	119	122	anti-parallel
Strand 5	E	205	213	parallel
Strand 6	E	353	362	anti-parallel
Strand 7	E	251	261	anti-parallel
Strand 8	E	332	334	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	64	68	first strand
Strand 2	E	94	97	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	242	248	first strand
Strand 2	E	337	342	anti-parallel
Strand 3	E	273	277	anti-parallel
Strand 4	E	285	286	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	23	first strand
Strand 2	F	184	195	anti-parallel
Strand 3	F	52	62	anti-parallel
Strand 4	F	159	162	anti-parallel
Strand 5	F	142	145	anti-parallel
Strand 6	F	137	138	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	184	195	anti-parallel
Strand 3	F	52	62	anti-parallel
Strand 4	F	166	168	anti-parallel

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There are 9 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	49	first strand
Strand 2	F	171	178	anti-parallel
Strand 3	F	105	111	anti-parallel
Strand 4	F	119	122	anti-parallel
Strand 5	F	205	213	parallel
Strand 6	F	353	362	anti-parallel
Strand 7	F	251	261	anti-parallel
Strand 8	F	320	326	anti-parallel
Strand 9	F	308	312	anti-parallel

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There are 8 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	41	49	first strand
Strand 2	F	171	178	anti-parallel
Strand 3	F	105	111	anti-parallel
Strand 4	F	119	122	anti-parallel
Strand 5	F	205	213	parallel
Strand 6	F	353	362	anti-parallel
Strand 7	F	251	261	anti-parallel
Strand 8	F	332	334	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	64	68	first strand
Strand 2	F	94	97	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	242	248	first strand
Strand 2	F	337	342	anti-parallel
Strand 3	F	273	277	anti-parallel
Strand 4	F	285	286	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V1W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V1W