Analysis of interatomic Contacts of Structural Units in PDB entry:
7V2V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V2V entry

There are 2 chains in PDB entry 7V2V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9LEU 382
D
 SER 9LEU 382
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 7V2V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 31Right-handed alpha
Helix 2
AA2
A
41 52Right-handed alpha
Helix 3
AA3
A
67 76Right-handed alpha
Helix 4
AA4
A
96 103Right-handed 310
Helix 5
AA5
A
116 135Right-handed alpha
Helix 6
AA6
A
151 164Right-handed alpha
Helix 7
AA7
A
179 191Right-handed alpha
Helix 8
AA8
A
206 214Right-handed alpha
Helix 9
AA9
A
227 232Right-handed alpha
Helix 10
AB1
A
241 245Right-handed 310
Helix 11
AB2
A
246 257Right-handed alpha
Helix 12
AB3
A
283 289Right-handed alpha
Helix 13
AB4
A
293 301Right-handed alpha
Helix 14
AB5
A
313 333Right-handed alpha
Helix 15
AB6
A
340 350Right-handed alpha
Helix 16
AB7
A
354 368Right-handed alpha
Helix 17
AB8
D
21 24Right-handed 310
Helix 18
AB9
D
25 33Right-handed alpha
Helix 19
AC1
D
41 52Right-handed alpha
Helix 20
AC2
D
66 77Right-handed alpha
Helix 21
AC3
D
95 103Right-handed 310
Helix 22
AC4
D
113 115Right-handed 310
Helix 23
AC5
D
116 123Right-handed alpha
Helix 24
AC6
D
124 135Right-handed alpha
Helix 25
AC7
D
139 146Right-handed 310
Helix 26
AC8
D
151 163Right-handed alpha
Helix 27
AC9
D
179 191Right-handed alpha
Helix 28
AD1
D
209 214Right-handed alpha
Helix 29
AD2
D
227 232Right-handed alpha
Helix 30
AD3
D
246 259Right-handed alpha
Helix 31
AD4
D
282 289Right-handed alpha
Helix 32
AD5
D
293 301Right-handed alpha
Helix 33
AD6
D
313 332Right-handed alpha
Helix 34
AD7
D
339 350Right-handed alpha
Helix 35
AD8
D
355 368Right-handed alpha
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There are 5 sheets in PDB entry 7V2V. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 38first strand
Strand 2
A
12 15parallel
Strand 3
A
55 60parallel
Strand 4
A
83 88parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
236 240parallel
Strand 3
A
274 279parallel
Strand 4
A
170 173parallel
Strand 5
A
303 306parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 339first strand
Strand 2
A
374 375parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
37 38first strand
Strand 2
D
13 15parallel
Strand 3
D
55 60parallel
Strand 4
D
83 88parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 202first strand
Strand 2
D
236 240parallel
Strand 3
D
274 279parallel
Strand 4
D
170 174parallel
Strand 5
D
303 307parallel
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