Analysis of interatomic Contacts of Structural Units in PDB entry:
7V2W

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V2W entry

There are 5 chains in PDB entry 7V2W (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	SER 2	GLY 602
G	MET 1	GLN 1255
H	VAL 7	LYS 391
I	MET 1	GLY 250
J	GLU 5	LYS 240

There are131 helices in PDB entry 7V2W. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	3	21	Right-handed alpha
Helix 2	AA2	F	42	46	Right-handed 310
Helix 3	AA3	F	61	78	Right-handed alpha
Helix 4	AA4	F	84	106	Right-handed alpha
Helix 5	AA5	F	116	131	Right-handed alpha
Helix 6	AA6	F	133	141	Right-handed alpha
Helix 7	AA7	F	142	147	Right-handed alpha
Helix 8	AA8	F	180	191	Right-handed alpha
Helix 9	AA9	F	197	214	Right-handed alpha
Helix 10	AB1	F	255	266	Right-handed alpha
Helix 11	AB2	F	270	275	Right-handed alpha
Helix 12	AB3	F	284	297	Right-handed alpha
Helix 13	AB4	F	302	313	Right-handed alpha
Helix 14	AB5	F	313	321	Right-handed alpha
Helix 15	AB6	F	342	348	Right-handed alpha
Helix 16	AB7	F	349	354	Right-handed alpha
Helix 17	AB8	F	356	361	Right-handed alpha
Helix 18	AB9	F	378	386	Right-handed alpha
Helix 19	AC1	F	396	405	Right-handed alpha
Helix 20	AC2	F	406	414	Right-handed alpha
Helix 21	AC3	F	417	428	Right-handed alpha
Helix 22	AC4	F	441	449	Right-handed alpha
Helix 23	AC5	F	449	454	Right-handed alpha
Helix 24	AC6	F	459	467	Right-handed alpha
Helix 25	AC7	F	468	481	Right-handed alpha
Helix 26	AC8	F	482	492	Right-handed alpha
Helix 27	AC9	F	525	532	Right-handed alpha
Helix 28	AD1	F	538	543	Right-handed alpha
Helix 29	AD2	F	547	563	Right-handed alpha
Helix 30	AD3	F	575	584	Right-handed alpha
Helix 31	AD4	G	4	15	Right-handed alpha
Helix 32	AD5	G	36	48	Right-handed alpha
Helix 33	AD6	G	57	74	Right-handed alpha
Helix 34	AD7	G	82	97	Right-handed alpha
Helix 35	AD8	G	104	117	Right-handed alpha
Helix 36	AD9	G	121	130	Right-handed alpha
Helix 37	AE1	G	135	142	Right-handed alpha
Helix 38	AE2	G	143	147	Right-handed 310
Helix 39	AE3	G	154	166	Right-handed alpha
Helix 40	AE4	G	182	193	Right-handed alpha
Helix 41	AE5	G	202	216	Right-handed alpha
Helix 42	AE6	G	220	231	Right-handed alpha
Helix 43	AE7	G	239	247	Right-handed alpha
Helix 44	AE8	G	274	282	Right-handed alpha
Helix 45	AE9	G	293	301	Right-handed alpha
Helix 46	AF1	G	302	307	Right-handed alpha
Helix 47	AF2	G	312	317	Right-handed alpha
Helix 48	AF3	G	322	341	Right-handed alpha
Helix 49	AF4	G	392	396	Right-handed alpha
Helix 50	AF5	G	397	399	Right-handed 310
Helix 51	AF6	G	403	415	Right-handed alpha
Helix 52	AF7	G	417	425	Right-handed alpha
Helix 53	AF8	G	436	457	Right-handed alpha
Helix 54	AF9	G	457	463	Right-handed alpha
Helix 55	AG1	G	463	468	Right-handed alpha
Helix 56	AG2	G	523	528	Right-handed alpha
Helix 57	AG3	G	538	541	Right-handed 310
Helix 58	AG4	G	542	560	Right-handed alpha
Helix 59	AG5	G	566	580	Right-handed alpha
Helix 60	AG6	G	581	586	Right-handed alpha
Helix 61	AG7	G	591	600	Right-handed alpha
Helix 62	AG8	G	601	605	Right-handed 310
Helix 63	AG9	G	606	617	Right-handed alpha
Helix 64	AH1	G	625	643	Right-handed alpha
Helix 65	AH2	G	653	665	Right-handed alpha
Helix 66	AH3	G	665	670	Right-handed alpha
Helix 67	AH4	G	670	675	Right-handed alpha
Helix 68	AH5	G	683	691	Right-handed alpha
Helix 69	AH6	G	692	694	Right-handed 310
Helix 70	AH7	G	695	711	Right-handed alpha
Helix 71	AH8	G	726	742	Right-handed alpha
Helix 72	AH9	G	750	761	Right-handed alpha
Helix 73	AI1	G	763	776	Right-handed alpha
Helix 74	AI2	G	786	791	Right-handed alpha
Helix 75	AI3	G	797	807	Right-handed alpha
Helix 76	AI4	G	814	828	Right-handed alpha
Helix 77	AI5	G	833	845	Right-handed alpha
Helix 78	AI6	G	853	877	Right-handed alpha
Helix 79	AI7	G	879	886	Right-handed alpha
Helix 80	AI8	G	899	907	Right-handed alpha
Helix 81	AI9	G	909	914	Right-handed alpha
Helix 82	AJ1	G	921	928	Right-handed alpha
Helix 83	AJ2	G	941	951	Right-handed alpha
Helix 84	AJ3	G	960	965	Right-handed alpha
Helix 85	AJ4	G	966	974	Right-handed alpha
Helix 86	AJ5	G	979	1013	Right-handed alpha
Helix 87	AJ6	G	1014	1019	Right-handed alpha
Helix 88	AJ7	G	1023	1034	Right-handed alpha
Helix 89	AJ8	G	1034	1042	Right-handed alpha
Helix 90	AJ9	G	1042	1057	Right-handed alpha
Helix 91	AK1	G	1058	1072	Right-handed alpha
Helix 92	AK2	G	1074	1079	Right-handed alpha
Helix 93	AK3	G	1083	1095	Right-handed alpha
Helix 94	AK4	G	1097	1106	Right-handed alpha
Helix 95	AK5	G	1111	1134	Right-handed alpha
Helix 96	AK6	G	1138	1152	Right-handed alpha
Helix 97	AK7	G	1153	1155	Right-handed 310
Helix 98	AK8	G	1158	1168	Right-handed alpha
Helix 99	AK9	G	1171	1176	Right-handed alpha
Helix 100	AL1	G	1181	1194	Right-handed alpha
Helix 101	AL2	G	1211	1231	Right-handed alpha
Helix 102	AL3	G	1241	1255	Right-handed alpha
Helix 103	AL4	H	8	12	Right-handed alpha
Helix 104	AL5	H	16	28	Right-handed alpha
Helix 105	AL6	H	43	54	Right-handed alpha
Helix 106	AL7	H	201	205	Right-handed alpha
Helix 107	AL8	H	373	389	Right-handed alpha
Helix 108	AL9	I	4	17	Right-handed alpha
Helix 109	AM1	I	21	42	Right-handed alpha
Helix 110	AM2	I	60	78	Right-handed alpha
Helix 111	AM3	I	79	98	Right-handed alpha
Helix 112	AM4	I	107	142	Right-handed alpha
Helix 113	AM5	I	151	156	Right-handed alpha
Helix 114	AM6	I	160	168	Right-handed alpha
Helix 115	AM7	I	198	235	Right-handed alpha
Helix 116	AM8	I	237	250	Right-handed alpha
Helix 117	AM9	J	8	13	Right-handed alpha
Helix 118	AN1	J	14	37	Right-handed alpha
Helix 119	AN2	J	45	52	Right-handed alpha
Helix 120	AN3	J	53	79	Right-handed alpha
Helix 121	AN4	J	81	86	Right-handed alpha
Helix 122	AN5	J	90	94	Right-handed 310
Helix 123	AN6	J	98	103	Right-handed alpha
Helix 124	AN7	J	103	111	Right-handed alpha
Helix 125	AN8	J	114	119	Right-handed alpha
Helix 126	AN9	J	150	158	Right-handed alpha
Helix 127	AO1	J	171	178	Right-handed alpha
Helix 128	AO2	J	201	213	Right-handed alpha
Helix 129	AO3	J	213	222	Right-handed alpha
Helix 130	AO4	J	227	232	Right-handed alpha
Helix 131	AO5	J	232	240	Right-handed alpha

There are 10 sheets in PDB entry 7V2W. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	473	475	first strand
Strand 2	G	480	482	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	497	498	first strand
Strand 2	G	502	506	anti-parallel
Strand 3	G	484	491	parallel
Strand 4	J	141	143	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	37	39	first strand
Strand 2	H	364	366	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	66	71	first strand
Strand 2	H	77	82	anti-parallel
Strand 3	H	87	91	anti-parallel
Strand 4	H	100	105	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	128	131	first strand
Strand 2	H	137	142	anti-parallel
Strand 3	H	149	155	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	165	168	first strand
Strand 2	H	174	178	anti-parallel
Strand 3	H	183	188	anti-parallel
Strand 4	H	195	200	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	214	217	first strand
Strand 2	H	223	227	anti-parallel
Strand 3	H	232	237	anti-parallel
Strand 4	H	245	250	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	256	261	first strand
Strand 2	H	267	272	anti-parallel
Strand 3	H	276	281	anti-parallel
Strand 4	H	287	292	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	298	303	first strand
Strand 2	H	309	314	anti-parallel
Strand 3	H	318	323	anti-parallel
Strand 4	H	329	334	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	146	150	first strand
Strand 2	I	189	193	anti-parallel
Strand 3	I	174	175	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V2W

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V2W