Analysis of interatomic Contacts of Structural Units in PDB entry:
7V3E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V3E entry

There are 3 chains in PDB entry 7V3E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 33	MET 312
B	ARG 33	MET 312
C	ARG 33	MET 312

There are 31 helices in PDB entry 7V3E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	51	62	Right-handed alpha
Helix 2	AA2	A	74	84	Right-handed alpha
Helix 3	AA3	A	93	99	Right-handed 310
Helix 4	AA4	A	100	104	Right-handed 310
Helix 5	AA5	A	127	132	Right-handed alpha
Helix 6	AA6	A	133	158	Right-handed alpha
Helix 7	AA7	A	161	163	Right-handed 310
Helix 8	AA8	A	164	169	Right-handed alpha
Helix 9	AA9	A	237	244	Right-handed alpha
Helix 10	AB1	A	298	311	Right-handed alpha
Helix 11	AB2	B	51	62	Right-handed alpha
Helix 12	AB3	B	74	84	Right-handed alpha
Helix 13	AB4	B	93	99	Right-handed 310
Helix 14	AB5	B	100	105	Right-handed 310
Helix 15	AB6	B	127	132	Right-handed alpha
Helix 16	AB7	B	133	158	Right-handed alpha
Helix 17	AB8	B	161	163	Right-handed 310
Helix 18	AB9	B	164	169	Right-handed alpha
Helix 19	AC1	B	237	244	Right-handed alpha
Helix 20	AC2	B	298	311	Right-handed alpha
Helix 21	AC3	C	51	62	Right-handed alpha
Helix 22	AC4	C	74	84	Right-handed alpha
Helix 23	AC5	C	85	87	Right-handed 310
Helix 24	AC6	C	93	99	Right-handed 310
Helix 25	AC7	C	100	104	Right-handed 310
Helix 26	AC8	C	127	132	Right-handed alpha
Helix 27	AC9	C	133	158	Right-handed alpha
Helix 28	AD1	C	161	163	Right-handed 310
Helix 29	AD2	C	164	169	Right-handed alpha
Helix 30	AD3	C	237	244	Right-handed alpha
Helix 31	AD4	C	298	312	Right-handed alpha

There are 12 sheets in PDB entry 7V3E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	39	43	anti-parallel
Strand 3	A	63	67	parallel
Strand 4	A	231	236	anti-parallel
Strand 5	A	204	208	anti-parallel
Strand 6	A	265	273	anti-parallel
Strand 7	A	178	186	anti-parallel
Strand 8	A	118	124	anti-parallel
Strand 9	A	110	113	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	195	198	first strand
Strand 2	A	255	258	anti-parallel
Strand 3	A	214	218	anti-parallel
Strand 4	A	221	224	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	277	first strand
Strand 2	A	280	281	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	284	288	first strand
Strand 2	A	292	297	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	48	first strand
Strand 2	B	39	43	anti-parallel
Strand 3	B	63	67	parallel
Strand 4	B	231	236	anti-parallel
Strand 5	B	204	208	anti-parallel
Strand 6	B	265	273	anti-parallel
Strand 7	B	178	186	anti-parallel
Strand 8	B	118	124	anti-parallel
Strand 9	B	110	113	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	195	198	first strand
Strand 2	B	255	258	anti-parallel
Strand 3	B	214	217	anti-parallel
Strand 4	B	222	224	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	276	277	first strand
Strand 2	B	280	281	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	284	287	first strand
Strand 2	B	293	297	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	48	first strand
Strand 2	C	39	43	anti-parallel
Strand 3	C	63	67	parallel
Strand 4	C	231	236	anti-parallel
Strand 5	C	204	208	anti-parallel
Strand 6	C	265	273	anti-parallel
Strand 7	C	178	186	anti-parallel
Strand 8	C	118	124	anti-parallel
Strand 9	C	110	113	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	195	198	first strand
Strand 2	C	255	258	anti-parallel
Strand 3	C	214	217	anti-parallel
Strand 4	C	222	224	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	277	first strand
Strand 2	C	280	281	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	284	288	first strand
Strand 2	C	292	297	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V3E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V3E