Analysis of interatomic Contacts of Structural Units in PDB entry:
7V3O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V3O entry

There is 1 chain in PDB entry 7V3O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 32ILE 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 7V3O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 62Right-handed alpha
Helix 2
AA2
A
74 84Right-handed alpha
Helix 3
AA3
A
93 99Right-handed 310
Helix 4
AA4
A
100 104Right-handed 310
Helix 5
AA5
A
127 132Right-handed alpha
Helix 6
AA6
A
133 158Right-handed alpha
Helix 7
AA7
A
161 163Right-handed 310
Helix 8
AA8
A
164 169Right-handed alpha
Helix 9
AA9
A
237 244Right-handed alpha
Helix 10
AB1
A
298 310Right-handed alpha
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There are 3 sheets in PDB entry 7V3O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
33 34first strand
Strand 2
A
222 224parallel
Strand 3
A
214 217anti-parallel
Strand 4
A
256 258anti-parallel
Strand 5
A
195 198anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
39 43anti-parallel
Strand 3
A
63 67parallel
Strand 4
A
231 236anti-parallel
Strand 5
A
204 208anti-parallel
Strand 6
A
265 273anti-parallel
Strand 7
A
178 186anti-parallel
Strand 8
A
118 124anti-parallel
Strand 9
A
110 113anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 288first strand
Strand 2
A
292 297anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il