Analysis of interatomic Contacts of Structural Units in PDB entry:
7V53


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V53 entry

There is 1 chain in PDB entry 7V53 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 24ALA 1074
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7V53. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
56 71Right-handed alpha
Helix 2
AA2
A
93 105Right-handed alpha
Helix 3
AA3
A
119 123Right-handed 310
Helix 4
AA4
A
125 136Right-handed alpha
Helix 5
AA5
A
157 164Right-handed 310
Helix 6
AA6
A
203 207Right-handed 310
Helix 7
AA7
A
225 235Right-handed alpha
Helix 8
AA8
A
329 340Right-handed alpha
Helix 9
AA9
A
347 362Right-handed alpha
Helix 10
AB1
A
369 387Right-handed alpha
Helix 11
AB2
A
387 396Right-handed alpha
Helix 12
AB3
A
418 434Right-handed alpha
Helix 13
AB4
A
438 442Right-handed 310
Helix 14
AB5
A
476 496Right-handed alpha
Helix 15
AB6
A
500 525Right-handed alpha
Helix 16
AB7
A
527 534Right-handed alpha
Helix 17
AB8
A
551 555Right-handed 310
Helix 18
AB9
A
575 590Right-handed alpha
Helix 19
AC1
A
607 619Right-handed alpha
Helix 20
AC2
A
647 655Right-handed alpha
Helix 21
AC3
A
656 659Right-handed 310
Helix 22
AC4
A
660 668Right-handed alpha
Helix 23
AC5
A
668 675Right-handed alpha
Helix 24
AC6
A
677 681Right-handed 310
Helix 25
AC7
A
682 692Right-handed alpha
Helix 26
AC8
A
695 721Right-handed alpha
Helix 27
AC9
A
730 746Right-handed alpha
Helix 28
AD1
A
765 780Right-handed alpha
Helix 29
AD2
A
785 799Right-handed alpha
Helix 30
AD3
A
806 812Right-handed alpha
Helix 31
AD4
A
821 826Right-handed 310
Helix 32
AD5
A
827 830Right-handed 310
Helix 33
AD6
A
874 879Right-handed alpha
Helix 34
AD7
A
910 924Right-handed alpha
Helix 35
AD8
A
937 944Right-handed 310
Helix 36
AD9
A
949 971Right-handed alpha
Helix 37
AE1
A
1012 1015Right-handed 310
Helix 38
AE2
A
1026 1030Right-handed 310
Helix 39
AE3
A
1069 1074Right-handed alpha
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There are 6 sheets in PDB entry 7V53. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 15 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 148first strand
Strand 2
A
109 114parallel
Strand 3
A
74 79parallel
Strand 4
A
170 173anti-parallel
Strand 5
A
177 181anti-parallel
Strand 6
A
469 473anti-parallel
Strand 7
A
46 54anti-parallel
Strand 8
A
566 574anti-parallel
Strand 9
A
885 892anti-parallel
Strand 10
A
865 869anti-parallel
Strand 11
A
857 861anti-parallel
Strand 12
A
622 627anti-parallel
Strand 13
A
750 754parallel
Strand 14
A
832 843parallel
Strand 15
A
846 851anti-parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 606first strand
Strand 2
A
566 574anti-parallel
Strand 3
A
885 892anti-parallel
Strand 4
A
865 869anti-parallel
Strand 5
A
857 861anti-parallel
Strand 6
A
622 627anti-parallel
Strand 7
A
750 754parallel
Strand 8
A
832 843parallel
Strand 9
A
1051 1053anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 217first strand
Strand 2
A
454 455anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
465 466first strand
Strand 2
A
853 854parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
895 898first strand
Strand 2
A
906 909anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1005 1007first strand
Strand 2
A
1017 1019anti-parallel
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