Analysis of interatomic Contacts of Structural Units in PDB entry:
7V5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V5C entry

There are 2 chains in PDB entry 7V5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 168LEU 739
B
 ALA 168LEU 739
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 7V5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
169 176Right-handed alpha
Helix 2
AA2
A
180 215Right-handed alpha
Helix 3
AA3
A
216 221Right-handed alpha
Helix 4
AA4
A
221 266Right-handed alpha
Helix 5
AA5
A
269 274Right-handed alpha
Helix 6
AA6
A
277 319Right-handed alpha
Helix 7
AA7
A
324 329Right-handed alpha
Helix 8
AA8
A
331 339Right-handed alpha
Helix 9
AA9
A
344 358Right-handed alpha
Helix 10
AB1
A
384 401Right-handed alpha
Helix 11
AB2
A
401 432Right-handed alpha
Helix 12
AB3
A
436 455Right-handed alpha
Helix 13
AB4
A
460 472Right-handed alpha
Helix 14
AB5
A
474 479Right-handed alpha
Helix 15
AB6
A
541 545Right-handed 310
Helix 16
AB7
A
567 569Right-handed 310
Helix 17
AB8
A
570 575Right-handed alpha
Helix 18
AB9
A
604 611Right-handed alpha
Helix 19
AC1
A
617 622Right-handed alpha
Helix 20
AC2
A
626 630Right-handed 310
Helix 21
AC3
A
632 637Right-handed alpha
Helix 22
AC4
A
645 654Right-handed alpha
Helix 23
AC5
A
665 670Right-handed alpha
Helix 24
AC6
A
673 682Right-handed alpha
Helix 25
AC7
A
696 702Right-handed alpha
Helix 26
AC8
A
719 725Right-handed alpha
Helix 27
AC9
A
733 738Right-handed 310
Helix 28
AD1
B
169 174Right-handed alpha
Helix 29
AD2
B
180 215Right-handed alpha
Helix 30
AD3
B
220 244Right-handed alpha
Helix 31
AD4
B
248 266Right-handed alpha
Helix 32
AD5
B
269 274Right-handed alpha
Helix 33
AD6
B
279 287Right-handed alpha
Helix 34
AD7
B
287 303Right-handed alpha
Helix 35
AD8
B
305 315Right-handed alpha
Helix 36
AD9
B
315 320Right-handed alpha
Helix 37
AE1
B
324 329Right-handed alpha
Helix 38
AE2
B
331 342Right-handed alpha
Helix 39
AE3
B
344 359Right-handed alpha
Helix 40
AE4
B
384 396Right-handed alpha
Helix 41
AE5
B
398 434Right-handed alpha
Helix 42
AE6
B
438 455Right-handed alpha
Helix 43
AE7
B
460 472Right-handed alpha
Helix 44
AE8
B
474 479Right-handed alpha
Helix 45
AE9
B
541 545Right-handed 310
Helix 46
AF1
B
567 569Right-handed 310
Helix 47
AF2
B
570 575Right-handed alpha
Helix 48
AF3
B
604 611Right-handed alpha
Helix 49
AF4
B
617 622Right-handed alpha
Helix 50
AF5
B
626 630Right-handed 310
Helix 51
AF6
B
632 637Right-handed alpha
Helix 52
AF7
B
642 654Right-handed alpha
Helix 53
AF8
B
673 683Right-handed alpha
Helix 54
AF9
B
719 725Right-handed alpha
Helix 55
AG1
B
729 734Right-handed alpha
Helix 56
AG2
B
735 738Right-handed 310
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There are 8 sheets in PDB entry 7V5C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
518 525first strand
Strand 2
A
500 507anti-parallel
Strand 3
A
558 561anti-parallel
Strand 4
A
564 565anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 533first strand
Strand 2
A
691 693parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 581first strand
Strand 2
A
659 662parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
707 710first strand
Strand 2
A
713 717anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
519 524first strand
Strand 2
B
500 506anti-parallel
Strand 3
B
558 561anti-parallel
Strand 4
B
564 565anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
531 533first strand
Strand 2
B
691 693parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
578 581first strand
Strand 2
B
659 662parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
707 709first strand
Strand 2
B
714 717anti-parallel
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