Analysis of interatomic Contacts of Structural Units in PDB entry:
7V67

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V67 entry

There are 4 chains in PDB entry 7V67 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	LEU 440
B	TYR 3	LEU 440
C	SER 2	LEU 440
D	SER 2	ARG 16

There are 81 helices in PDB entry 7V67. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	57	61	Right-handed 310
Helix 2	AA2	A	63	73	Right-handed alpha
Helix 3	AA3	A	73	82	Right-handed alpha
Helix 4	AA4	A	87	100	Right-handed alpha
Helix 5	AA5	A	108	128	Right-handed alpha
Helix 6	AA6	A	130	140	Right-handed alpha
Helix 7	AA7	A	159	162	Right-handed 310
Helix 8	AA8	A	180	204	Right-handed alpha
Helix 9	AA9	A	205	209	Right-handed 310
Helix 10	AB1	A	222	238	Right-handed alpha
Helix 11	AB2	A	250	253	Right-handed 310
Helix 12	AB3	A	270	274	Right-handed 310
Helix 13	AB4	A	276	291	Right-handed alpha
Helix 14	AB5	A	304	316	Right-handed alpha
Helix 15	AB6	A	330	341	Right-handed alpha
Helix 16	AB7	A	349	354	Right-handed alpha
Helix 17	AB8	A	355	369	Right-handed alpha
Helix 18	AB9	A	385	394	Right-handed alpha
Helix 19	AC1	A	406	424	Right-handed alpha
Helix 20	AC2	A	431	440	Right-handed 310
Helix 21	AC3	B	57	61	Right-handed 310
Helix 22	AC4	B	63	73	Right-handed alpha
Helix 23	AC5	B	73	82	Right-handed alpha
Helix 24	AC6	B	87	98	Right-handed alpha
Helix 25	AC7	B	108	128	Right-handed alpha
Helix 26	AC8	B	130	139	Right-handed alpha
Helix 27	AC9	B	159	162	Right-handed 310
Helix 28	AD1	B	180	204	Right-handed alpha
Helix 29	AD2	B	205	209	Right-handed 310
Helix 30	AD3	B	222	238	Right-handed alpha
Helix 31	AD4	B	250	253	Right-handed 310
Helix 32	AD5	B	270	274	Right-handed 310
Helix 33	AD6	B	276	291	Right-handed alpha
Helix 34	AD7	B	304	316	Right-handed alpha
Helix 35	AD8	B	330	341	Right-handed alpha
Helix 36	AD9	B	349	354	Right-handed alpha
Helix 37	AE1	B	355	369	Right-handed alpha
Helix 38	AE2	B	385	394	Right-handed alpha
Helix 39	AE3	B	406	424	Right-handed alpha
Helix 40	AE4	B	431	434	Right-handed 310
Helix 41	AE5	B	436	440	Right-handed 310
Helix 42	AE6	C	57	61	Right-handed 310
Helix 43	AE7	C	63	73	Right-handed alpha
Helix 44	AE8	C	73	82	Right-handed alpha
Helix 45	AE9	C	87	100	Right-handed alpha
Helix 46	AF1	C	108	128	Right-handed alpha
Helix 47	AF2	C	130	139	Right-handed alpha
Helix 48	AF3	C	180	204	Right-handed alpha
Helix 49	AF4	C	205	209	Right-handed 310
Helix 50	AF5	C	222	238	Right-handed alpha
Helix 51	AF6	C	250	253	Right-handed 310
Helix 52	AF7	C	270	274	Right-handed 310
Helix 53	AF8	C	276	291	Right-handed alpha
Helix 54	AF9	C	304	316	Right-handed alpha
Helix 55	AG1	C	330	341	Right-handed alpha
Helix 56	AG2	C	349	354	Right-handed alpha
Helix 57	AG3	C	355	369	Right-handed alpha
Helix 58	AG4	C	385	394	Right-handed alpha
Helix 59	AG5	C	406	424	Right-handed alpha
Helix 60	AG6	C	431	440	Right-handed 310
Helix 61	AG7	D	57	61	Right-handed 310
Helix 62	AG8	D	63	73	Right-handed alpha
Helix 63	AG9	D	73	82	Right-handed alpha
Helix 64	AH1	D	87	100	Right-handed alpha
Helix 65	AH2	D	108	128	Right-handed alpha
Helix 66	AH3	D	130	139	Right-handed alpha
Helix 67	AH4	D	159	162	Right-handed 310
Helix 68	AH5	D	180	204	Right-handed alpha
Helix 69	AH6	D	205	209	Right-handed 310
Helix 70	AH7	D	222	238	Right-handed alpha
Helix 71	AH8	D	250	253	Right-handed 310
Helix 72	AH9	D	270	274	Right-handed 310
Helix 73	AI1	D	276	291	Right-handed alpha
Helix 74	AI2	D	304	316	Right-handed alpha
Helix 75	AI3	D	330	341	Right-handed alpha
Helix 76	AI4	D	349	354	Right-handed alpha
Helix 77	AI5	D	355	369	Right-handed alpha
Helix 78	AI6	D	385	394	Right-handed alpha
Helix 79	AI7	D	406	424	Right-handed alpha
Helix 80	AI8	D	431	434	Right-handed 310
Helix 81	AI9	D	436	440	Right-handed 310

There are 16 sheets in PDB entry 7V67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	6	13	first strand
Strand 2	A	19	27	anti-parallel
Strand 3	A	30	35	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	148	first strand
Strand 2	A	427	429	parallel

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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	157	first strand
Strand 2	A	170	174	anti-parallel
Strand 3	A	244	248	anti-parallel
Strand 4	A	293	297	parallel
Strand 5	A	320	323	parallel
Strand 6	A	345	348	parallel
Strand 7	A	372	376	parallel
Strand 8	A	398	400	parallel
Strand 9	A	150	157	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	255	256	first strand
Strand 2	A	259	260	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	6	13	first strand
Strand 2	B	19	27	anti-parallel
Strand 3	B	30	35	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	148	first strand
Strand 2	B	427	429	parallel

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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	151	first strand
Strand 2	B	398	400	parallel
Strand 3	B	372	376	parallel
Strand 4	B	345	348	parallel
Strand 5	B	320	323	parallel
Strand 6	B	293	297	parallel
Strand 7	B	244	248	parallel
Strand 8	B	170	174	anti-parallel
Strand 9	B	153	157	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	255	256	first strand
Strand 2	B	259	260	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	6	13	first strand
Strand 2	C	19	27	anti-parallel
Strand 3	C	30	35	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	148	first strand
Strand 2	C	427	429	parallel

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There are 9 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	157	first strand
Strand 2	C	170	174	anti-parallel
Strand 3	C	244	248	anti-parallel
Strand 4	C	293	297	parallel
Strand 5	C	320	323	parallel
Strand 6	C	345	348	parallel
Strand 7	C	372	376	parallel
Strand 8	C	398	400	parallel
Strand 9	C	150	157	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	255	256	first strand
Strand 2	C	259	260	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	6	13	first strand
Strand 2	D	19	27	anti-parallel
Strand 3	D	30	35	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	148	first strand
Strand 2	D	427	429	parallel

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There are 9 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	150	151	first strand
Strand 2	D	398	400	parallel
Strand 3	D	372	376	parallel
Strand 4	D	345	348	parallel
Strand 5	D	320	323	parallel
Strand 6	D	293	297	parallel
Strand 7	D	244	248	parallel
Strand 8	D	170	174	anti-parallel
Strand 9	D	153	157	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	255	256	first strand
Strand 2	D	259	260	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V67

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V67