Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6B


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6B entry

There are 2 chains in PDB entry 7V6B (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8CYS 1720
B
 ASP 95LEU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 7V6B. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 22Right-handed alpha
Helix 2
AA2
A
33 45Right-handed alpha
Helix 3
AA3
A
52 56Right-handed 310
Helix 4
AA4
A
66 81Right-handed alpha
Helix 5
AA5
A
89 93Right-handed 310
Helix 6
AA6
A
98 109Right-handed alpha
Helix 7
AA7
A
116 125Right-handed alpha
Helix 8
AA8
A
129 131Right-handed 310
Helix 9
AA9
A
141 144Right-handed 310
Helix 10
AB1
A
148 158Right-handed alpha
Helix 11
AB2
A
183 196Right-handed alpha
Helix 12
AB3
A
232 251Right-handed alpha
Helix 13
AB4
A
274 292Right-handed alpha
Helix 14
AB5
A
292 313Right-handed alpha
Helix 15
AB6
A
316 343Right-handed alpha
Helix 16
AB7
A
355 362Right-handed alpha
Helix 17
AB8
A
364 378Right-handed alpha
Helix 18
AB9
A
394 412Right-handed alpha
Helix 19
AC1
A
437 453Right-handed alpha
Helix 20
AC2
A
484 495Right-handed alpha
Helix 21
AC3
A
510 535Right-handed alpha
Helix 22
AC4
A
570 582Right-handed alpha
Helix 23
AC5
A
598 606Right-handed alpha
Helix 24
AC6
A
607 611Right-handed 310
Helix 25
AC7
A
638 656Right-handed alpha
Helix 26
AC8
A
667 681Right-handed alpha
Helix 27
AC9
A
682 687Right-handed alpha
Helix 28
AD1
A
741 749Right-handed alpha
Helix 29
AD2
A
793 809Right-handed alpha
Helix 30
AD3
A
845 852Right-handed alpha
Helix 31
AD4
A
862 869Right-handed alpha
Helix 32
AD5
A
874 878Right-handed 310
Helix 33
AD6
A
918 925Right-handed alpha
Helix 34
AD7
A
982 991Right-handed alpha
Helix 35
AD8
A
991 1016Right-handed alpha
Helix 36
AD9
A
1087 1091Right-handed 310
Helix 37
AE1
A
1103 1116Right-handed alpha
Helix 38
AE2
A
1174 1182Right-handed alpha
Helix 39
AE3
A
1183 1186Right-handed 310
Helix 40
AE4
A
1190 1199Right-handed alpha
Helix 41
AE5
A
1200 1204Right-handed 310
Helix 42
AE6
A
1209 1232Right-handed alpha
Helix 43
AE7
A
1236 1248Right-handed alpha
Helix 44
AE8
A
1249 1260Right-handed alpha
Helix 45
AE9
A
1261 1265Right-handed 310
Helix 46
AF1
A
1285 1295Right-handed alpha
Helix 47
AF2
A
1295 1302Right-handed alpha
Helix 48
AF3
A
1303 1309Right-handed alpha
Helix 49
AF4
A
1313 1318Right-handed 310
Helix 50
AF5
A
1324 1341Right-handed alpha
Helix 51
AF6
A
1348 1357Right-handed alpha
Helix 52
AF7
A
1363 1393Right-handed alpha
Helix 53
AF8
A
1404 1408Right-handed 310
Helix 54
AF9
A
1423 1430Right-handed alpha
Helix 55
AG1
A
1432 1441Right-handed alpha
Helix 56
AG2
A
1447 1455Right-handed alpha
Helix 57
AG3
A
1468 1491Right-handed alpha
Helix 58
AG4
A
1495 1507Right-handed alpha
Helix 59
AG5
A
1510 1519Right-handed alpha
Helix 60
AG6
A
1521 1525Right-handed 310
Helix 61
AG7
A
1529 1547Right-handed alpha
Helix 62
AG8
A
1551 1557Right-handed alpha
Helix 63
AG9
A
1610 1628Right-handed alpha
Helix 64
AH1
A
1629 1651Right-handed alpha
Helix 65
AH2
A
1655 1662Right-handed alpha
Helix 66
AH3
A
1701 1720Right-handed alpha
Helix 67
AH4
B
96 107Right-handed alpha
Helix 68
AH5
B
145 164Right-handed alpha
Helix 69
AH6
B
189 198Right-handed alpha
Helix 70
AH7
B
203 210Right-handed alpha
Helix 71
AH8
B
221 225Right-handed 310
Helix 72
AH9
B
231 244Right-handed alpha
Helix 73
AI1
B
251 261Right-handed alpha
Helix 74
AI2
B
294 310Right-handed alpha
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There are 12 sheets in PDB entry 7V6B. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 88first strand
Strand 2
A
111 115parallel
Strand 3
A
59 64parallel
Strand 4
A
133 139parallel
Strand 5
A
167 172parallel
Strand 6
A
24 27parallel
Strand 7
A
199 200parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 223first strand
Strand 2
A
501 505parallel
Strand 3
A
475 478parallel
Strand 4
A
388 391parallel
Strand 5
A
457 460parallel
Strand 6
A
421 424parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
558 559first strand
Strand 2
A
565 566anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 596first strand
Strand 2
A
616 619anti-parallel
Strand 3
A
630 631anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
702 706first strand
Strand 2
A
1358 1362anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 770first strand
Strand 2
A
777 781anti-parallel
Strand 3
A
723 733anti-parallel
Strand 4
A
786 789anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
768 770first strand
Strand 2
A
777 781anti-parallel
Strand 3
A
723 733anti-parallel
Strand 4
A
754 758anti-parallel
Strand 5
A
830 835anti-parallel
Strand 6
A
843 844anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
819 820first strand
Strand 2
A
1282 1283anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
939 944first strand
Strand 2
A
893 899anti-parallel
Strand 3
A
881 884anti-parallel
Strand 4
A
976 979anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1669 1670first strand
Strand 2
A
1684 1688anti-parallel
Strand 3
A
1691 1695anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 116first strand
Strand 2
B
128 132anti-parallel
Strand 3
B
139 143anti-parallel
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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
265 266first strand
Strand 2
B
279 283anti-parallel
Strand 3
B
290 293anti-parallel
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