Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6D entry

There are 2 chains in PDB entry 7V6D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 83ALA 449
B
 ILE 84ALA 449
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 39 helices in PDB entry 7V6D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
83 97Right-handed alpha
Helix 2
AA2
A
99 105Right-handed alpha
Helix 3
AA3
A
110 114Right-handed 310
Helix 4
AA4
A
141 148Right-handed alpha
Helix 5
AA5
A
172 178Right-handed alpha
Helix 6
AA6
A
180 185Right-handed alpha
Helix 7
AA7
A
205 223Right-handed alpha
Helix 8
AA8
A
235 248Right-handed alpha
Helix 9
AA9
A
249 253Right-handed 310
Helix 10
AB1
A
268 275Right-handed alpha
Helix 11
AB2
A
289 295Right-handed alpha
Helix 12
AB3
A
299 308Right-handed alpha
Helix 13
AB4
A
333 337Right-handed 310
Helix 14
AB5
A
354 358Right-handed alpha
Helix 15
AB6
A
362 366Right-handed 310
Helix 16
AB7
A
371 375Right-handed 310
Helix 17
AB8
A
376 388Right-handed alpha
Helix 18
AB9
A
399 404Right-handed alpha
Helix 19
AC1
A
413 434Right-handed alpha
Helix 20
AC2
B
85 97Right-handed alpha
Helix 21
AC3
B
99 105Right-handed alpha
Helix 22
AC4
B
110 114Right-handed 310
Helix 23
AC5
B
141 148Right-handed alpha
Helix 24
AC6
B
172 178Right-handed alpha
Helix 25
AC7
B
180 185Right-handed alpha
Helix 26
AC8
B
198 203Right-handed 310
Helix 27
AC9
B
205 223Right-handed alpha
Helix 28
AD1
B
235 248Right-handed alpha
Helix 29
AD2
B
249 253Right-handed 310
Helix 30
AD3
B
268 275Right-handed alpha
Helix 31
AD4
B
289 295Right-handed alpha
Helix 32
AD5
B
299 308Right-handed alpha
Helix 33
AD6
B
354 358Right-handed alpha
Helix 34
AD7
B
362 366Right-handed 310
Helix 35
AD8
B
371 375Right-handed 310
Helix 36
AD9
B
376 388Right-handed alpha
Helix 37
AE1
B
399 404Right-handed alpha
Helix 38
AE2
B
414 434Right-handed alpha
Helix 39
AE3
B
445 449Right-handed 310
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There are 4 sheets in PDB entry 7V6D. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
149 150first strand
Strand 2
A
192 196anti-parallel
Strand 3
A
162 166parallel
Strand 4
A
229 234parallel
Strand 5
A
255 261parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 321first strand
Strand 2
A
349 353parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
149 150first strand
Strand 2
B
192 196anti-parallel
Strand 3
B
162 166parallel
Strand 4
B
229 234parallel
Strand 5
B
255 261parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 321first strand
Strand 2
B
349 353parallel
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