Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6E

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V6E entry

There are 9 chains in PDB entry 7V6E (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 117	PRO 193
B	ASN 117	PRO 193
C	ASN 117	PRO 193
D	ASN 117	PRO 193
E	ASN 117	PRO 193
F	ASN 117	PRO 193
G	ASN 117	PRO 193
H	ASN 117	PRO 193
I	ASN 117	PRO 193

There are 18 helices in PDB entry 7V6E. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	138	151	Right-handed alpha
Helix 2	AA2	A	168	175	Right-handed alpha
Helix 3	AA3	B	138	151	Right-handed alpha
Helix 4	AA4	B	168	175	Right-handed alpha
Helix 5	AA5	C	138	151	Right-handed alpha
Helix 6	AA6	C	168	175	Right-handed alpha
Helix 7	AA7	D	138	151	Right-handed alpha
Helix 8	AA8	D	168	173	Right-handed alpha
Helix 9	AA9	E	138	150	Right-handed alpha
Helix 10	AB1	E	168	175	Right-handed alpha
Helix 11	AB2	F	138	150	Right-handed alpha
Helix 12	AB3	F	168	175	Right-handed alpha
Helix 13	AB4	G	138	150	Right-handed alpha
Helix 14	AB5	G	168	175	Right-handed alpha
Helix 15	AB6	H	138	151	Right-handed alpha
Helix 16	AB7	H	168	175	Right-handed alpha
Helix 17	AB8	I	138	151	Right-handed alpha
Helix 18	AB9	I	168	174	Right-handed alpha

There are 9 sheets in PDB entry 7V6E. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	131	136	first strand
Strand 2	A	119	124	anti-parallel
Strand 3	A	179	184	parallel
Strand 4	A	156	159	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	131	136	first strand
Strand 2	B	119	125	anti-parallel
Strand 3	B	179	184	parallel
Strand 4	B	156	159	anti-parallel
Strand 5	B	165	166	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	131	136	first strand
Strand 2	C	119	124	anti-parallel
Strand 3	C	179	184	parallel
Strand 4	C	156	159	anti-parallel
Strand 5	C	165	166	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	131	136	first strand
Strand 2	D	119	124	anti-parallel
Strand 3	D	179	184	parallel
Strand 4	D	156	159	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	131	136	first strand
Strand 2	E	119	124	anti-parallel
Strand 3	E	179	184	parallel
Strand 4	E	156	159	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	131	136	first strand
Strand 2	F	119	124	anti-parallel
Strand 3	F	179	184	parallel
Strand 4	F	156	159	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	131	136	first strand
Strand 2	G	119	124	anti-parallel
Strand 3	G	179	184	parallel
Strand 4	G	156	159	anti-parallel
Strand 5	G	165	166	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	131	136	first strand
Strand 2	H	119	124	anti-parallel
Strand 3	H	179	184	parallel
Strand 4	H	156	159	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	131	136	first strand
Strand 2	I	119	124	anti-parallel
Strand 3	I	179	184	parallel
Strand 4	I	156	159	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V6E

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6E