Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6F entry

There are 2 chains in PDB entry 7V6F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2LEU 358
B
 PRO 2LEU 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 7V6F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 8Right-handed 310
Helix 2
AA2
A
14 28Right-handed alpha
Helix 3
AA3
A
38 52Right-handed alpha
Helix 4
AA4
A
61 68Right-handed alpha
Helix 5
AA5
A
78 96Right-handed alpha
Helix 6
AA6
A
97 100Right-handed 310
Helix 7
AA7
A
111 113Right-handed 310
Helix 8
AA8
A
114 133Right-handed alpha
Helix 9
AA9
A
148 165Right-handed alpha
Helix 10
AB1
A
197 209Right-handed alpha
Helix 11
AB2
A
238 250Right-handed alpha
Helix 12
AB3
A
270 280Right-handed alpha
Helix 13
AB4
A
288 301Right-handed alpha
Helix 14
AB5
A
305 309Right-handed 310
Helix 15
AB6
A
324 329Right-handed alpha
Helix 16
AB7
A
329 352Right-handed alpha
Helix 17
AB8
B
4 8Right-handed 310
Helix 18
AB9
B
13 28Right-handed alpha
Helix 19
AC1
B
38 52Right-handed alpha
Helix 20
AC2
B
61 70Right-handed alpha
Helix 21
AC3
B
78 96Right-handed alpha
Helix 22
AC4
B
97 99Right-handed 310
Helix 23
AC5
B
111 113Right-handed 310
Helix 24
AC6
B
114 133Right-handed alpha
Helix 25
AC7
B
148 164Right-handed alpha
Helix 26
AC8
B
165 167Right-handed 310
Helix 27
AC9
B
197 209Right-handed alpha
Helix 28
AD1
B
237 252Right-handed alpha
Helix 29
AD2
B
270 280Right-handed alpha
Helix 30
AD3
B
288 301Right-handed alpha
Helix 31
AD4
B
302 310Right-handed 310
Helix 32
AD5
B
314 319Right-handed alpha
Helix 33
AD6
B
324 329Right-handed alpha
Helix 34
AD7
B
329 352Right-handed alpha
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There are 3 sheets in PDB entry 7V6F. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 11first strand
Strand 2
A
102 107parallel
Strand 3
A
56 60parallel
Strand 4
A
31 35parallel
Strand 5
A
282 287parallel
Strand 6
A
261 263parallel
Strand 7
A
215 218parallel
Strand 8
A
169 173parallel
Strand 9
A
139 143parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
10 11first strand
Strand 2
B
102 107parallel
Strand 3
B
56 60parallel
Strand 4
B
31 35parallel
Strand 5
B
282 287parallel
Strand 6
B
261 263parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
139 143first strand
Strand 2
B
169 174parallel
Strand 3
B
215 219parallel
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