Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6H entry

There are 2 chains in PDB entry 7V6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 21GLN 303
B
 MET 21GLN 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 7V6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 31Right-handed alpha
Helix 2
AA2
A
43 48Right-handed alpha
Helix 3
AA3
A
52 68Right-handed alpha
Helix 4
AA4
A
84 94Right-handed alpha
Helix 5
AA5
A
104 118Right-handed alpha
Helix 6
AA6
A
149 153Right-handed 310
Helix 7
AA7
A
155 166Right-handed alpha
Helix 8
AA8
A
199 209Right-handed alpha
Helix 9
AA9
A
226 244Right-handed alpha
Helix 10
AB1
A
246 248Right-handed 310
Helix 11
AB2
A
249 266Right-handed alpha
Helix 12
AB3
A
266 281Right-handed alpha
Helix 13
AB4
A
282 289Right-handed 310
Helix 14
AB5
B
24 31Right-handed alpha
Helix 15
AB6
B
44 48Right-handed 310
Helix 16
AB7
B
52 68Right-handed alpha
Helix 17
AB8
B
84 94Right-handed alpha
Helix 18
AB9
B
104 118Right-handed alpha
Helix 19
AC1
B
149 153Right-handed 310
Helix 20
AC2
B
155 166Right-handed alpha
Helix 21
AC3
B
199 210Right-handed alpha
Helix 22
AC4
B
226 246Right-handed alpha
Helix 23
AC5
B
249 266Right-handed alpha
Helix 24
AC6
B
266 281Right-handed alpha
Helix 25
AC7
B
282 289Right-handed 310
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There are 4 sheets in PDB entry 7V6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 39first strand
Strand 2
A
224 225anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
97 102parallel
Strand 3
A
75 80parallel
Strand 4
A
141 147parallel
Strand 5
A
167 179parallel
Strand 6
A
293 300anti-parallel
Strand 7
A
213 219anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 39first strand
Strand 2
B
224 225anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 128first strand
Strand 2
B
97 102parallel
Strand 3
B
75 80parallel
Strand 4
B
141 147parallel
Strand 5
B
167 179parallel
Strand 6
B
293 300anti-parallel
Strand 7
B
213 219anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il