Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6L entry

There are 2 chains in PDB entry 7V6L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 13LYS 362
B
 LEU 11LYS 362
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 7V6L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 27Right-handed alpha
Helix 2
AA2
A
29 41Right-handed alpha
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
57 64Right-handed alpha
Helix 5
AA5
A
71 86Right-handed alpha
Helix 6
AA6
A
109 114Right-handed 310
Helix 7
AA7
A
123 131Right-handed alpha
Helix 8
AA8
A
132 140Right-handed alpha
Helix 9
AA9
A
141 148Right-handed alpha
Helix 10
AB1
A
151 158Right-handed alpha
Helix 11
AB2
A
160 168Right-handed alpha
Helix 12
AB3
A
168 194Right-handed alpha
Helix 13
AB4
A
211 219Right-handed alpha
Helix 14
AB5
A
231 236Right-handed alpha
Helix 15
AB6
A
266 270Right-handed 310
Helix 16
AB7
A
271 285Right-handed alpha
Helix 17
AB8
A
306 323Right-handed alpha
Helix 18
AB9
A
331 341Right-handed alpha
Helix 19
AC1
B
12 27Right-handed alpha
Helix 20
AC2
B
29 41Right-handed alpha
Helix 21
AC3
B
42 51Right-handed alpha
Helix 22
AC4
B
57 65Right-handed alpha
Helix 23
AC5
B
71 86Right-handed alpha
Helix 24
AC6
B
109 114Right-handed 310
Helix 25
AC7
B
123 131Right-handed alpha
Helix 26
AC8
B
132 137Right-handed alpha
Helix 27
AC9
B
138 140Right-handed 310
Helix 28
AD1
B
141 149Right-handed alpha
Helix 29
AD2
B
151 158Right-handed alpha
Helix 30
AD3
B
160 165Right-handed alpha
Helix 31
AD4
B
168 194Right-handed alpha
Helix 32
AD5
B
211 221Right-handed alpha
Helix 33
AD6
B
231 237Right-handed alpha
Helix 34
AD7
B
266 270Right-handed 310
Helix 35
AD8
B
271 286Right-handed alpha
Helix 36
AD9
B
306 323Right-handed alpha
Helix 37
AE1
B
330 341Right-handed alpha
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There are 5 sheets in PDB entry 7V6L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
89 92first strand
Strand 2
A
104 107anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
244 248first strand
Strand 2
A
225 230parallel
Strand 3
A
202 206parallel
Strand 4
A
260 264parallel
Strand 5
A
291 296parallel
Strand 6
A
355 361anti-parallel
Strand 7
A
345 352anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
298 299first strand
Strand 2
A
329 330parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
89 94first strand
Strand 2
B
102 107anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
244 248first strand
Strand 2
B
225 230parallel
Strand 3
B
202 206parallel
Strand 4
B
260 264parallel
Strand 5
B
291 296parallel
Strand 6
B
355 361anti-parallel
Strand 7
B
345 352anti-parallel
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