Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6M entry

There is 1 chain in PDB entry 7V6M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 36GLU 605
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 7 helices in PDB entry 7V6M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
63 68Right-handed alpha
Helix 2
AA2
A
234 239Right-handed alpha
Helix 3
AA3
A
268 272Right-handed 310
Helix 4
AA4
A
278 286Right-handed alpha
Helix 5
AA5
A
382 386Right-handed 310
Helix 6
AA6
A
498 501Right-handed 310
Helix 7
AA7
A
560 564Right-handed 310
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There are 8 sheets in PDB entry 7V6M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
76 80parallel
Strand 3
A
102 107parallel
Strand 4
A
154 157parallel
Strand 5
A
197 204parallel
Strand 6
A
242 249parallel
Strand 7
A
287 293parallel
Strand 8
A
310 311parallel
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There are 14 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 42first strand
Strand 2
A
76 80parallel
Strand 3
A
102 107parallel
Strand 4
A
154 157parallel
Strand 5
A
197 204parallel
Strand 6
A
242 249parallel
Strand 7
A
287 293parallel
Strand 8
A
314 316parallel
Strand 9
A
371 373parallel
Strand 10
A
402 404parallel
Strand 11
A
426 429parallel
Strand 12
A
450 453parallel
Strand 13
A
477 480parallel
Strand 14
A
503 506parallel
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There are 14 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
84 86first strand
Strand 2
A
114 116parallel
Strand 3
A
160 163parallel
Strand 4
A
207 212parallel
Strand 5
A
252 257parallel
Strand 6
A
296 298parallel
Strand 7
A
319 321parallel
Strand 8
A
376 378parallel
Strand 9
A
407 409parallel
Strand 10
A
432 434parallel
Strand 11
A
456 459parallel
Strand 12
A
483 486parallel
Strand 13
A
509 511parallel
Strand 14
A
523 525parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
139 149parallel
Strand 3
A
122 126anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 92first strand
Strand 2
A
139 149parallel
Strand 3
A
184 192parallel
Strand 4
A
223 229parallel
Strand 5
A
259 266parallel
Strand 6
A
305 308parallel
Strand 7
A
362 365parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
337 339first strand
Strand 2
A
346 350anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
393 395first strand
Strand 2
A
416 419parallel
Strand 3
A
441 444parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
398 399first strand
Strand 2
A
423 424parallel
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