Analysis of interatomic Contacts of Structural Units in PDB entry:
7V6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V6Q entry

There are 8 chains in PDB entry 7V6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 154
B
 ARG 40ALA 135
C
 ARG 23GLY 102
D
 ASP 40SER 320
E
 ALA 2GLU 154
F
 ARG 40ALA 135
G
 ARG 23GLY 102
H
 ASP 40SER 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 7V6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 52Right-handed 310
Helix 2
AA2
A
80 84Right-handed 310
Helix 3
AA3
A
85 89Right-handed 310
Helix 4
AA4
A
119 125Right-handed alpha
Helix 5
AA5
B
44 49Right-handed alpha
Helix 6
AA6
B
63 78Right-handed alpha
Helix 7
AA7
B
85 113Right-handed alpha
Helix 8
AA8
B
114 116Right-handed 310
Helix 9
AA9
B
120 131Right-handed alpha
Helix 10
AB1
C
30 42Right-handed alpha
Helix 11
AB2
C
49 76Right-handed alpha
Helix 12
AB3
C
82 92Right-handed alpha
Helix 13
AB4
D
41 57Right-handed alpha
Helix 14
AB5
D
58 78Right-handed alpha
Helix 15
AB6
D
81 83Right-handed 310
Helix 16
AB7
D
84 102Right-handed alpha
Helix 17
AB8
D
174 192Right-handed alpha
Helix 18
AB9
D
195 216Right-handed alpha
Helix 19
AC1
D
218 237Right-handed alpha
Helix 20
AC2
D
241 258Right-handed alpha
Helix 21
AC3
D
260 289Right-handed alpha
Helix 22
AC4
D
294 319Right-handed alpha
Helix 23
AC5
E
50 52Right-handed 310
Helix 24
AC6
E
80 84Right-handed 310
Helix 25
AC7
E
85 89Right-handed 310
Helix 26
AC8
E
119 125Right-handed alpha
Helix 27
AC9
F
44 49Right-handed alpha
Helix 28
AD1
F
63 79Right-handed alpha
Helix 29
AD2
F
85 113Right-handed alpha
Helix 30
AD3
F
114 116Right-handed 310
Helix 31
AD4
F
120 131Right-handed alpha
Helix 32
AD5
G
30 42Right-handed alpha
Helix 33
AD6
G
49 77Right-handed alpha
Helix 34
AD7
G
82 92Right-handed alpha
Helix 35
AD8
H
41 57Right-handed alpha
Helix 36
AD9
H
58 78Right-handed alpha
Helix 37
AE1
H
81 83Right-handed 310
Helix 38
AE2
H
84 102Right-handed alpha
Helix 39
AE3
H
174 193Right-handed alpha
Helix 40
AE4
H
195 216Right-handed alpha
Helix 41
AE5
H
218 237Right-handed alpha
Helix 42
AE6
H
241 258Right-handed alpha
Helix 43
AE7
H
260 285Right-handed alpha
Helix 44
AE8
H
299 319Right-handed alpha
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There are 9 sheets in PDB entry 7V6Q. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 12first strand
Strand 2
A
22 30anti-parallel
Strand 3
A
68 76anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
135 148anti-parallel
Strand 3
A
104 117anti-parallel
Strand 4
A
91 101anti-parallel
Strand 5
A
38 45anti-parallel
Strand 6
A
54 62anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
135 148anti-parallel
Strand 3
C
95 97anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 84first strand
Strand 2
C
80 81parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 12first strand
Strand 2
E
22 30anti-parallel
Strand 3
E
68 76anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
16 17first strand
Strand 2
E
135 148anti-parallel
Strand 3
E
104 117anti-parallel
Strand 4
E
91 101anti-parallel
Strand 5
E
38 45anti-parallel
Strand 6
E
54 62anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
16 17first strand
Strand 2
E
135 148anti-parallel
Strand 3
G
95 97anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
83 84first strand
Strand 2
G
80 81parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
118 119first strand
Strand 2
G
45 46parallel
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