Analysis of interatomic Contacts of Structural Units in PDB entry:
7V7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V7L entry

There are 2 chains in PDB entry 7V7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 98VAL 464
B
 ASP 19THR 358
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 7V7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
98 116Right-handed alpha
Helix 2
AA2
A
127 142Right-handed alpha
Helix 3
AA3
A
160 172Right-handed alpha
Helix 4
AA4
A
192 198Right-handed alpha
Helix 5
AA5
A
200 205Right-handed alpha
Helix 6
AA6
A
208 213Right-handed alpha
Helix 7
AA7
A
214 216Right-handed 310
Helix 8
AA8
A
217 225Right-handed alpha
Helix 9
AA9
A
379 384Right-handed alpha
Helix 10
AB1
A
387 392Right-handed alpha
Helix 11
AB2
A
395 400Right-handed 310
Helix 12
AB3
A
401 418Right-handed alpha
Helix 13
AB4
B
20 38Right-handed alpha
Helix 14
AB5
B
44 49Right-handed 310
Helix 15
AB6
B
50 70Right-handed alpha
Helix 16
AB7
B
85 91Right-handed alpha
Helix 17
AB8
B
110 116Right-handed alpha
Helix 18
AB9
B
118 123Right-handed alpha
Helix 19
AC1
B
126 130Right-handed 310
Helix 20
AC2
B
132 134Right-handed 310
Helix 21
AC3
B
135 143Right-handed alpha
Helix 22
AC4
B
178 182Right-handed 310
Helix 23
AC5
B
255 261Right-handed alpha
Helix 24
AC6
B
263 268Right-handed alpha
Helix 25
AC7
B
271 276Right-handed 310
Helix 26
AC8
B
277 279Right-handed 310
Helix 27
AC9
B
280 295Right-handed alpha
Helix 28
AD1
B
350 358Right-handed alpha
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There are 6 sheets in PDB entry 7V7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
186 189first strand
Strand 2
A
173 180anti-parallel
Strand 3
A
334 343anti-parallel
Strand 4
A
303 315anti-parallel
Strand 5
A
260 268anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
362 367anti-parallel
Strand 3
A
454 463anti-parallel
Strand 4
A
436 447anti-parallel
Strand 5
A
423 430anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
104 107first strand
Strand 2
B
94 98anti-parallel
Strand 3
B
216 223anti-parallel
Strand 4
B
183 194anti-parallel
Strand 5
B
159 168anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 171first strand
Strand 2
B
174 175anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
238 243anti-parallel
Strand 3
B
331 338anti-parallel
Strand 4
B
311 321anti-parallel
Strand 5
B
296 298anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 252first strand
Strand 2
B
238 243anti-parallel
Strand 3
B
331 338anti-parallel
Strand 4
B
311 321anti-parallel
Strand 5
B
302 305anti-parallel
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