Analysis of interatomic Contacts of Structural Units in PDB entry:
7V7U

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V7U entry

There are 3 chains in PDB entry 7V7U (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ASP 1144
B	GLN 14	ASP 1144
C	GLN 14	ASP 1144

There are 62 helices in PDB entry 7V7U. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	292	302	Right-handed alpha
Helix 2	AA2	A	336	341	Right-handed alpha
Helix 3	AA3	A	363	369	Right-handed alpha
Helix 4	AA4	A	382	387	Right-handed 310
Helix 5	AA5	A	401	405	Right-handed 310
Helix 6	AA6	A	414	420	Right-handed alpha
Helix 7	AA7	A	436	441	Right-handed alpha
Helix 8	AA8	A	735	742	Right-handed alpha
Helix 9	AA9	A	744	753	Right-handed alpha
Helix 10	AB1	A	757	781	Right-handed alpha
Helix 11	AB2	A	814	824	Right-handed alpha
Helix 12	AB3	A	864	883	Right-handed alpha
Helix 13	AB4	A	884	888	Right-handed 310
Helix 14	AB5	A	895	906	Right-handed alpha
Helix 15	AB6	A	910	917	Right-handed alpha
Helix 16	AB7	A	917	939	Right-handed alpha
Helix 17	AB8	A	943	963	Right-handed alpha
Helix 18	AB9	A	974	982	Right-handed alpha
Helix 19	AC1	A	983	1031	Right-handed alpha
Helix 20	AC2	A	1138	1143	Right-handed alpha
Helix 21	AC3	B	292	302	Right-handed alpha
Helix 22	AC4	B	336	341	Right-handed alpha
Helix 23	AC5	B	362	369	Right-handed alpha
Helix 24	AC6	B	381	385	Right-handed 310
Helix 25	AC7	B	403	408	Right-handed 310
Helix 26	AC8	B	414	420	Right-handed alpha
Helix 27	AC9	B	436	441	Right-handed alpha
Helix 28	AD1	B	632	636	Right-handed alpha
Helix 29	AD2	B	736	741	Right-handed alpha
Helix 30	AD3	B	744	752	Right-handed alpha
Helix 31	AD4	B	756	781	Right-handed alpha
Helix 32	AD5	B	814	824	Right-handed alpha
Helix 33	AD6	B	864	883	Right-handed alpha
Helix 34	AD7	B	884	889	Right-handed 310
Helix 35	AD8	B	895	906	Right-handed alpha
Helix 36	AD9	B	911	916	Right-handed alpha
Helix 37	AE1	B	917	939	Right-handed alpha
Helix 38	AE2	B	943	963	Right-handed alpha
Helix 39	AE3	B	964	966	Right-handed 310
Helix 40	AE4	B	974	980	Right-handed alpha
Helix 41	AE5	B	983	1031	Right-handed alpha
Helix 42	AE6	B	1138	1144	Right-handed alpha
Helix 43	AE7	C	292	302	Right-handed alpha
Helix 44	AE8	C	336	341	Right-handed alpha
Helix 45	AE9	C	363	369	Right-handed alpha
Helix 46	AF1	C	381	387	Right-handed 310
Helix 47	AF2	C	414	420	Right-handed alpha
Helix 48	AF3	C	735	741	Right-handed alpha
Helix 49	AF4	C	744	752	Right-handed alpha
Helix 50	AF5	C	753	755	Right-handed 310
Helix 51	AF6	C	758	781	Right-handed alpha
Helix 52	AF7	C	814	824	Right-handed alpha
Helix 53	AF8	C	864	883	Right-handed alpha
Helix 54	AF9	C	884	888	Right-handed 310
Helix 55	AG1	C	895	906	Right-handed alpha
Helix 56	AG2	C	910	917	Right-handed alpha
Helix 57	AG3	C	917	939	Right-handed alpha
Helix 58	AG4	C	943	963	Right-handed alpha
Helix 59	AG5	C	964	966	Right-handed 310
Helix 60	AG6	C	974	982	Right-handed alpha
Helix 61	AG7	C	983	1031	Right-handed alpha
Helix 62	AG8	C	1138	1144	Right-handed alpha

There are 43 sheets in PDB entry 7V7U. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	263	267	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	186	195	anti-parallel
Strand 6	A	198	207	anti-parallel
Strand 7	A	220	227	anti-parallel
Strand 8	A	36	37	parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	C	563	565	parallel
Strand 3	C	571	575	anti-parallel
Strand 4	C	582	586	anti-parallel
Strand 5	C	544	552	anti-parallel
Strand 6	C	537	541	anti-parallel
Strand 7	C	323	324	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	269	277	anti-parallel
Strand 3	A	283	288	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	235	240	anti-parallel
Strand 3	A	101	107	anti-parallel
Strand 4	A	116	121	anti-parallel
Strand 5	A	126	135	anti-parallel
Strand 6	A	158	170	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	309	317	first strand
Strand 2	A	590	597	anti-parallel
Strand 3	A	607	611	anti-parallel
Strand 4	A	646	649	anti-parallel
Strand 5	A	640	643	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	537	541	parallel
Strand 3	A	544	552	anti-parallel
Strand 4	A	583	586	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	352	356	first strand
Strand 2	A	392	400	anti-parallel
Strand 3	A	506	514	anti-parallel
Strand 4	A	429	435	anti-parallel
Strand 5	A	374	377	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	450	452	first strand
Strand 2	A	490	492	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	471	472	first strand
Strand 2	A	486	487	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	571	574	first strand
Strand 2	A	563	565	anti-parallel
Strand 3	B	42	43	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	653	first strand
Strand 2	A	691	694	parallel
Strand 3	A	668	671	anti-parallel
Strand 4	A	662	665	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	709	711	first strand
Strand 2	A	1072	1074	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	715	726	first strand
Strand 2	A	1057	1068	anti-parallel
Strand 3	A	1045	1054	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	731	734	first strand
Strand 2	A	856	859	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1118	1120	first strand
Strand 2	A	1084	1088	anti-parallel
Strand 3	A	1079	1081	anti-parallel
Strand 4	A	1131	1132	parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1092	1095	first strand
Strand 2	A	1100	1103	anti-parallel
Strand 3	A	1111	1112	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	263	267	anti-parallel
Strand 4	B	89	96	anti-parallel
Strand 5	B	186	195	anti-parallel
Strand 6	B	198	207	anti-parallel
Strand 7	B	220	227	anti-parallel
Strand 8	B	36	37	parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	269	277	anti-parallel
Strand 3	B	283	288	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	235	240	anti-parallel
Strand 3	B	101	107	anti-parallel
Strand 4	B	116	121	anti-parallel
Strand 5	B	126	135	anti-parallel
Strand 6	B	158	170	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	309	317	first strand
Strand 2	B	590	597	anti-parallel
Strand 3	B	607	611	anti-parallel
Strand 4	B	646	649	anti-parallel
Strand 5	B	640	643	anti-parallel

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There are 7 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	324	326	first strand
Strand 2	B	537	541	parallel
Strand 3	B	544	552	anti-parallel
Strand 4	B	582	586	anti-parallel
Strand 5	B	571	575	anti-parallel
Strand 6	B	563	565	anti-parallel
Strand 7	C	42	43	parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	352	356	first strand
Strand 2	B	393	401	anti-parallel
Strand 3	B	505	512	anti-parallel
Strand 4	B	429	435	anti-parallel
Strand 5	B	374	377	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	359	360	first strand
Strand 2	B	522	523	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	450	452	first strand
Strand 2	B	490	492	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	471	472	first strand
Strand 2	B	486	487	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	653	first strand
Strand 2	B	691	694	parallel
Strand 3	B	668	671	anti-parallel
Strand 4	B	662	665	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	699	701	first strand
Strand 2	C	785	787	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	715	726	first strand
Strand 2	B	1057	1068	anti-parallel
Strand 3	B	1045	1054	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	731	734	first strand
Strand 2	B	856	859	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1118	1123	first strand
Strand 2	B	1084	1088	anti-parallel
Strand 3	B	1079	1081	anti-parallel
Strand 4	B	1131	1132	parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1092	1095	first strand
Strand 2	B	1100	1104	anti-parallel
Strand 3	B	1107	1111	anti-parallel

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There are 8 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	263	267	anti-parallel
Strand 4	C	89	96	anti-parallel
Strand 5	C	186	195	anti-parallel
Strand 6	C	198	207	anti-parallel
Strand 7	C	220	227	anti-parallel
Strand 8	C	36	37	parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	269	277	anti-parallel
Strand 3	C	283	288	anti-parallel

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There are 6 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	235	240	anti-parallel
Strand 3	C	101	107	anti-parallel
Strand 4	C	116	121	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	166	170	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	309	317	first strand
Strand 2	C	590	597	anti-parallel
Strand 3	C	607	611	anti-parallel
Strand 4	C	646	649	anti-parallel
Strand 5	C	640	643	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	352	356	first strand
Strand 2	C	392	401	anti-parallel
Strand 3	C	505	514	anti-parallel
Strand 4	C	429	435	anti-parallel
Strand 5	C	374	377	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	450	452	first strand
Strand 2	C	490	492	anti-parallel

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There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	471	472	first strand
Strand 2	C	486	487	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	652	653	first strand
Strand 2	C	691	694	parallel
Strand 3	C	668	671	anti-parallel
Strand 4	C	662	665	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	709	711	first strand
Strand 2	C	1072	1075	anti-parallel
Strand 3	C	1092	1095	anti-parallel
Strand 4	C	1100	1103	anti-parallel
Strand 5	C	1111	1112	anti-parallel

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There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	715	726	first strand
Strand 2	C	1057	1068	anti-parallel
Strand 3	C	1045	1054	anti-parallel

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There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	731	733	first strand
Strand 2	C	857	859	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1118	1120	first strand
Strand 2	C	1084	1088	anti-parallel
Strand 3	C	1079	1081	anti-parallel
Strand 4	C	1131	1132	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V7U

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V7U