Analysis of interatomic Contacts of Structural Units in PDB entry:
7V81

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V81 entry

There are 5 chains in PDB entry 7V81 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN 14	ASP 1146
C	GLN 14	ASP 1146
B	GLN 14	ASP 1146
D	SER 19	ALA 614
E	SER 19	ALA 614

There are119 helices in PDB entry 7V81. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	294	304	Right-handed alpha
Helix 2	AA2	A	338	343	Right-handed alpha
Helix 3	AA3	A	364	371	Right-handed alpha
Helix 4	AA4	A	383	388	Right-handed 310
Helix 5	AA5	A	404	408	Right-handed 310
Helix 6	AA6	A	416	422	Right-handed alpha
Helix 7	AA7	A	737	743	Right-handed alpha
Helix 8	AA8	A	746	755	Right-handed alpha
Helix 9	AA9	A	761	783	Right-handed alpha
Helix 10	AB1	A	816	826	Right-handed alpha
Helix 11	AB2	A	866	884	Right-handed alpha
Helix 12	AB3	A	886	890	Right-handed 310
Helix 13	AB4	A	898	909	Right-handed alpha
Helix 14	AB5	A	913	919	Right-handed alpha
Helix 15	AB6	A	919	941	Right-handed alpha
Helix 16	AB7	A	945	965	Right-handed alpha
Helix 17	AB8	A	966	968	Right-handed 310
Helix 18	AB9	A	976	984	Right-handed alpha
Helix 19	AC1	A	985	1034	Right-handed alpha
Helix 20	AC2	A	1116	1118	Right-handed 310
Helix 21	AC3	A	1140	1146	Right-handed alpha
Helix 22	AC4	C	294	304	Right-handed alpha
Helix 23	AC5	C	338	343	Right-handed alpha
Helix 24	AC6	C	349	353	Right-handed 310
Helix 25	AC7	C	365	371	Right-handed alpha
Helix 26	AC8	C	383	389	Right-handed 310
Helix 27	AC9	C	403	410	Right-handed 310
Helix 28	AD1	C	417	422	Right-handed alpha
Helix 29	AD2	C	438	443	Right-handed alpha
Helix 30	AD3	C	633	638	Right-handed 310
Helix 31	AD4	C	746	755	Right-handed alpha
Helix 32	AD5	C	758	783	Right-handed alpha
Helix 33	AD6	C	816	825	Right-handed alpha
Helix 34	AD7	C	866	884	Right-handed alpha
Helix 35	AD8	C	886	890	Right-handed 310
Helix 36	AD9	C	897	908	Right-handed alpha
Helix 37	AE1	C	913	919	Right-handed alpha
Helix 38	AE2	C	919	941	Right-handed alpha
Helix 39	AE3	C	945	965	Right-handed alpha
Helix 40	AE4	C	966	968	Right-handed 310
Helix 41	AE5	C	976	984	Right-handed alpha
Helix 42	AE6	C	985	1033	Right-handed alpha
Helix 43	AE7	C	1116	1118	Right-handed 310
Helix 44	AE8	C	1140	1146	Right-handed alpha
Helix 45	AE9	B	294	304	Right-handed alpha
Helix 46	AF1	B	338	343	Right-handed alpha
Helix 47	AF2	B	364	371	Right-handed alpha
Helix 48	AF3	B	385	389	Right-handed 310
Helix 49	AF4	B	416	422	Right-handed alpha
Helix 50	AF5	B	737	743	Right-handed alpha
Helix 51	AF6	B	746	755	Right-handed alpha
Helix 52	AF7	B	758	783	Right-handed alpha
Helix 53	AF8	B	816	826	Right-handed alpha
Helix 54	AF9	B	866	884	Right-handed alpha
Helix 55	AG1	B	886	890	Right-handed 310
Helix 56	AG2	B	898	909	Right-handed alpha
Helix 57	AG3	B	913	919	Right-handed alpha
Helix 58	AG4	B	919	941	Right-handed alpha
Helix 59	AG5	B	945	965	Right-handed alpha
Helix 60	AG6	B	966	968	Right-handed 310
Helix 61	AG7	B	976	983	Right-handed alpha
Helix 62	AG8	B	985	1032	Right-handed alpha
Helix 63	AG9	B	1140	1146	Right-handed alpha
Helix 64	AH1	D	21	53	Right-handed alpha
Helix 65	AH2	D	56	79	Right-handed alpha
Helix 66	AH3	D	90	102	Right-handed alpha
Helix 67	AH4	D	109	128	Right-handed alpha
Helix 68	AH5	D	147	154	Right-handed alpha
Helix 69	AH6	D	158	172	Right-handed alpha
Helix 70	AH7	D	175	194	Right-handed alpha
Helix 71	AH8	D	198	204	Right-handed alpha
Helix 72	AH9	D	218	229	Right-handed alpha
Helix 73	AI1	D	233	252	Right-handed alpha
Helix 74	AI2	D	275	283	Right-handed 310
Helix 75	AI3	D	293	300	Right-handed alpha
Helix 76	AI4	D	303	317	Right-handed alpha
Helix 77	AI5	D	326	331	Right-handed alpha
Helix 78	AI6	D	365	385	Right-handed alpha
Helix 79	AI7	D	389	393	Right-handed 310
Helix 80	AI8	D	400	412	Right-handed alpha
Helix 81	AI9	D	414	421	Right-handed alpha
Helix 82	AJ1	D	431	444	Right-handed alpha
Helix 83	AJ2	D	449	465	Right-handed alpha
Helix 84	AJ3	D	473	484	Right-handed alpha
Helix 85	AJ4	D	503	508	Right-handed alpha
Helix 86	AJ5	D	513	532	Right-handed alpha
Helix 87	AJ6	D	548	559	Right-handed alpha
Helix 88	AJ7	D	565	570	Right-handed alpha
Helix 89	AJ8	D	583	588	Right-handed alpha
Helix 90	AJ9	D	588	597	Right-handed alpha
Helix 91	AK1	E	21	53	Right-handed alpha
Helix 92	AK2	E	55	79	Right-handed alpha
Helix 93	AK3	E	90	102	Right-handed alpha
Helix 94	AK4	E	109	128	Right-handed alpha
Helix 95	AK5	E	147	154	Right-handed alpha
Helix 96	AK6	E	158	172	Right-handed alpha
Helix 97	AK7	E	175	194	Right-handed alpha
Helix 98	AK8	E	198	205	Right-handed alpha
Helix 99	AK9	E	218	229	Right-handed alpha
Helix 100	AL1	E	230	232	Right-handed 310
Helix 101	AL2	E	233	252	Right-handed alpha
Helix 102	AL3	E	275	279	Right-handed 310
Helix 103	AL4	E	293	301	Right-handed alpha
Helix 104	AL5	E	303	319	Right-handed alpha
Helix 105	AL6	E	326	331	Right-handed alpha
Helix 106	AL7	E	365	385	Right-handed alpha
Helix 107	AL8	E	389	393	Right-handed 310
Helix 108	AL9	E	397	412	Right-handed alpha
Helix 109	AM1	E	414	421	Right-handed alpha
Helix 110	AM2	E	431	447	Right-handed alpha
Helix 111	AM3	E	449	466	Right-handed alpha
Helix 112	AM4	E	473	484	Right-handed alpha
Helix 113	AM5	E	503	508	Right-handed alpha
Helix 114	AM6	E	513	532	Right-handed alpha
Helix 115	AM7	E	538	542	Right-handed 310
Helix 116	AM8	E	548	559	Right-handed alpha
Helix 117	AM9	E	565	570	Right-handed alpha
Helix 118	AN1	E	582	588	Right-handed alpha
Helix 119	AN2	E	588	597	Right-handed alpha

There are 49 sheets in PDB entry 7V81. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	30	first strand
Strand 2	A	61	65	anti-parallel
Strand 3	A	265	269	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	188	197	anti-parallel
Strand 6	A	200	209	anti-parallel
Strand 7	A	224	229	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	42	43	first strand
Strand 2	C	565	567	parallel
Strand 3	C	573	577	anti-parallel
Strand 4	C	584	588	anti-parallel
Strand 5	C	546	554	anti-parallel
Strand 6	C	539	543	anti-parallel
Strand 7	C	325	328	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	55	first strand
Strand 2	A	271	279	anti-parallel
Strand 3	A	285	290	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	84	85	first strand
Strand 2	A	237	240	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	116	120	anti-parallel
Strand 5	A	126	133	anti-parallel
Strand 6	A	163	172	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	311	319	first strand
Strand 2	A	592	599	anti-parallel
Strand 3	A	609	613	anti-parallel
Strand 4	A	648	651	anti-parallel
Strand 5	A	643	645	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	539	543	parallel
Strand 3	A	546	554	anti-parallel
Strand 4	A	585	588	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	354	358	first strand
Strand 2	A	394	402	anti-parallel
Strand 3	A	508	516	anti-parallel
Strand 4	A	431	437	anti-parallel
Strand 5	A	376	379	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	452	454	first strand
Strand 2	A	492	494	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	474	first strand
Strand 2	A	488	489	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	573	576	first strand
Strand 2	A	565	567	anti-parallel
Strand 3	B	42	43	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	654	660	first strand
Strand 2	A	693	697	parallel
Strand 3	A	670	673	anti-parallel
Strand 4	A	664	667	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	711	712	first strand
Strand 2	A	1075	1076	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	717	728	first strand
Strand 2	A	1059	1070	anti-parallel
Strand 3	A	1047	1056	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	734	736	first strand
Strand 2	A	858	860	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	788	789	first strand
Strand 2	C	702	703	parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1120	1125	first strand
Strand 2	A	1086	1090	anti-parallel
Strand 3	A	1081	1083	anti-parallel
Strand 4	A	1133	1134	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1094	1097	first strand
Strand 2	A	1102	1105	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	27	30	first strand
Strand 2	C	61	65	anti-parallel
Strand 3	C	265	269	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	C	188	196	anti-parallel
Strand 6	C	201	209	anti-parallel
Strand 7	C	224	229	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	42	43	first strand
Strand 2	B	565	567	parallel
Strand 3	B	573	576	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	55	first strand
Strand 2	C	271	279	anti-parallel
Strand 3	C	285	290	anti-parallel

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There are 6 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	84	85	first strand
Strand 2	C	237	240	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	116	120	anti-parallel
Strand 5	C	126	131	anti-parallel
Strand 6	C	168	172	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	143	144	first strand
Strand 2	C	245	246	parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	311	319	first strand
Strand 2	C	592	599	anti-parallel
Strand 3	C	609	613	anti-parallel
Strand 4	C	648	651	anti-parallel
Strand 5	C	642	645	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	354	358	first strand
Strand 2	C	395	402	anti-parallel
Strand 3	C	508	514	anti-parallel
Strand 4	C	431	437	anti-parallel
Strand 5	C	376	379	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	391	392	first strand
Strand 2	C	524	525	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	452	454	first strand
Strand 2	C	492	494	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	474	first strand
Strand 2	C	488	489	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	654	655	first strand
Strand 2	C	693	696	parallel
Strand 3	C	670	673	anti-parallel
Strand 4	C	665	667	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1077	anti-parallel
Strand 3	C	1094	1097	anti-parallel
Strand 4	C	1102	1105	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	735	736	first strand
Strand 2	C	858	859	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1125	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1081	1083	anti-parallel
Strand 4	C	1133	1134	parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	30	first strand
Strand 2	B	61	65	anti-parallel
Strand 3	B	265	269	anti-parallel
Strand 4	B	90	96	anti-parallel
Strand 5	B	188	197	anti-parallel
Strand 6	B	200	209	anti-parallel
Strand 7	B	224	229	anti-parallel

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There are 3 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	55	first strand
Strand 2	B	271	279	anti-parallel
Strand 3	B	285	290	anti-parallel

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There are 6 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	84	85	first strand
Strand 2	B	237	238	anti-parallel
Strand 3	B	104	107	anti-parallel
Strand 4	B	116	120	anti-parallel
Strand 5	B	126	134	anti-parallel
Strand 6	B	162	172	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	311	319	first strand
Strand 2	B	592	599	anti-parallel
Strand 3	B	609	613	anti-parallel
Strand 4	B	648	651	anti-parallel
Strand 5	B	642	645	anti-parallel

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There are 4 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	325	326	first strand
Strand 2	B	539	543	parallel
Strand 3	B	546	554	anti-parallel
Strand 4	B	585	588	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	354	358	first strand
Strand 2	B	394	402	anti-parallel
Strand 3	B	508	516	anti-parallel
Strand 4	B	431	437	anti-parallel
Strand 5	B	376	379	anti-parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	454	first strand
Strand 2	B	492	494	anti-parallel

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There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	474	first strand
Strand 2	B	488	489	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	654	660	first strand
Strand 2	B	693	697	parallel
Strand 3	B	670	673	anti-parallel
Strand 4	B	664	667	anti-parallel

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There are 3 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	717	728	first strand
Strand 2	B	1059	1070	anti-parallel
Strand 3	B	1047	1056	anti-parallel

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There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	733	736	first strand
Strand 2	B	858	861	anti-parallel

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There are 4 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1120	1125	first strand
Strand 2	B	1086	1090	anti-parallel
Strand 3	B	1081	1083	anti-parallel
Strand 4	B	1133	1134	parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1094	1097	first strand
Strand 2	B	1102	1105	anti-parallel

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There are 2 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	132	133	first strand
Strand 2	D	141	142	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	347	350	first strand
Strand 2	D	356	359	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	132	133	first strand
Strand 2	E	141	142	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	352	first strand
Strand 2	E	355	359	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V81

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V81