Analysis of interatomic Contacts of Structural Units in PDB entry:
7V99

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 7V99 entry

There are 5 chains in PDB entry 7V99 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 2	ASP 1132
K	THR 16	VAL 100
L	SER 32	LYS 125
R	G 33	G 334
S	T 19	G 24

There are 47 helices in PDB entry 7V99. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	18	Right-handed alpha
Helix 2	AA2	A	24	29	Right-handed alpha
Helix 3	AA3	A	31	42	Right-handed alpha
Helix 4	AA4	A	44	53	Right-handed alpha
Helix 5	AA5	A	76	92	Right-handed alpha
Helix 6	AA6	A	122	131	Right-handed alpha
Helix 7	AA7	A	132	140	Right-handed alpha
Helix 8	AA8	A	143	154	Right-handed alpha
Helix 9	AA9	A	175	180	Right-handed alpha
Helix 10	AB1	A	345	350	Right-handed alpha
Helix 11	AB2	A	353	359	Right-handed alpha
Helix 12	AB3	A	384	389	Right-handed alpha
Helix 13	AB4	A	390	402	Right-handed alpha
Helix 14	AB5	A	404	413	Right-handed alpha
Helix 15	AB6	A	415	430	Right-handed alpha
Helix 16	AB7	A	436	454	Right-handed alpha
Helix 17	AB8	A	457	471	Right-handed alpha
Helix 18	AB9	A	474	479	Right-handed alpha
Helix 19	AC1	A	480	496	Right-handed alpha
Helix 20	AC2	A	505	509	Right-handed alpha
Helix 21	AC3	A	530	558	Right-handed alpha
Helix 22	AC4	A	578	596	Right-handed alpha
Helix 23	AC5	A	602	611	Right-handed alpha
Helix 24	AC6	A	644	672	Right-handed alpha
Helix 25	AC7	A	682	699	Right-handed alpha
Helix 26	AC8	A	721	737	Right-handed alpha
Helix 27	AC9	A	772	783	Right-handed alpha
Helix 28	AD1	A	801	815	Right-handed alpha
Helix 29	AD2	A	835	854	Right-handed alpha
Helix 30	AD3	A	856	861	Right-handed alpha
Helix 31	AD4	A	876	889	Right-handed alpha
Helix 32	AD5	A	953	958	Right-handed alpha
Helix 33	AD6	A	965	982	Right-handed alpha
Helix 34	AD7	A	993	1018	Right-handed alpha
Helix 35	AD8	A	1029	1051	Right-handed alpha
Helix 36	AD9	A	1066	1083	Right-handed alpha
Helix 37	AE1	A	1090	1107	Right-handed alpha
Helix 38	AE2	A	1108	1119	Right-handed alpha
Helix 39	AE3	K	17	22	Right-handed alpha
Helix 40	AE4	K	27	37	Right-handed alpha
Helix 41	AE5	K	46	72	Right-handed alpha
Helix 42	AE6	K	79	90	Right-handed alpha
Helix 43	AE7	K	90	98	Right-handed alpha
Helix 44	AE8	L	37	49	Right-handed alpha
Helix 45	AE9	L	55	83	Right-handed alpha
Helix 46	AF1	L	90	102	Right-handed alpha
Helix 47	AF2	L	103	124	Right-handed alpha

There are 11 sheets in PDB entry 7V99. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	23	first strand
Strand 2	A	54	57	anti-parallel
Strand 3	A	157	162	anti-parallel
Strand 4	A	168	170	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	102	103	first strand
Strand 2	A	118	119	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	106	108	first strand
Strand 2	A	113	115	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	325	326	first strand
Strand 2	A	503	504	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	561	564	first strand
Strand 2	A	574	577	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	598	600	first strand
Strand 2	A	824	827	anti-parallel
Strand 3	A	816	819	anti-parallel
Strand 4	A	617	625	parallel
Strand 5	A	630	637	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	862	865	first strand
Strand 2	A	870	874	anti-parallel
Strand 3	A	707	713	anti-parallel
Strand 4	A	900	906	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	755	765	first strand
Strand 2	A	740	750	anti-parallel
Strand 3	A	789	799	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	928	929	first strand
Strand 2	A	933	935	anti-parallel
Strand 3	A	942	944	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	42	43	first strand
Strand 2	L	88	89	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	77	78	first strand
Strand 2	L	53	54	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 7V99

Analysis of interatomic Contacts of Structural Units in PDB entry:
7V99