Analysis of interatomic Contacts of Structural Units in PDB entry:
7V9G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V9G entry

There are 12 chains in PDB entry 7V9G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 712ILE 816
B
 T 1 C 16
C
 G 1 A 16
D
 SER 714LYS 825
E
 T 1 C 16
F
 G 1 A 16
G
 PRO 715LYS 819
H
 T 1 C 16
I
 G 1 A 16
J
 VAL 712ASN 810
K
 T 1 C 16
L
 G 1 A 16
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 7V9G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
719 730Right-handed alpha
Helix 2
AA2
A
732 745Right-handed alpha
Helix 3
AA3
A
746 750Right-handed 310
Helix 4
AA4
A
753 756Right-handed 310
Helix 5
AA5
A
770 785Right-handed alpha
Helix 6
AA6
A
792 797Right-handed alpha
Helix 7
AA7
A
797 808Right-handed alpha
Helix 8
AA8
D
719 730Right-handed alpha
Helix 9
AA9
D
732 745Right-handed alpha
Helix 10
AB1
D
746 750Right-handed 310
Helix 11
AB2
D
753 756Right-handed 310
Helix 12
AB3
D
770 784Right-handed alpha
Helix 13
AB4
D
784 797Right-handed alpha
Helix 14
AB5
D
797 808Right-handed alpha
Helix 15
AB6
D
812 825Right-handed alpha
Helix 16
AB7
G
719 730Right-handed alpha
Helix 17
AB8
G
732 745Right-handed alpha
Helix 18
AB9
G
746 750Right-handed 310
Helix 19
AC1
G
753 756Right-handed 310
Helix 20
AC2
G
770 784Right-handed alpha
Helix 21
AC3
G
784 797Right-handed alpha
Helix 22
AC4
G
797 808Right-handed alpha
Helix 23
AC5
G
812 819Right-handed alpha
Helix 24
AC6
J
719 730Right-handed alpha
Helix 25
AC7
J
732 745Right-handed alpha
Helix 26
AC8
J
746 750Right-handed 310
Helix 27
AC9
J
753 756Right-handed 310
Helix 28
AD1
J
770 785Right-handed alpha
Helix 29
AD2
J
792 797Right-handed alpha
Helix 30
AD3
J
797 808Right-handed alpha
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There are 4 sheets in PDB entry 7V9G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
758 759first strand
Strand 2
A
767 768parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
758 759first strand
Strand 2
D
767 768parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
758 759first strand
Strand 2
G
767 768parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
758 759first strand
Strand 2
J
767 768parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il