Analysis of interatomic Contacts of Structural Units in PDB entry:
7V9N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V9N entry

There is 1 chain in PDB entry 7V9N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2SER 860
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 7V9N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 17Right-handed alpha
Helix 2
AA2
A
135 139Right-handed 310
Helix 3
AA3
A
191 195Right-handed 310
Helix 4
AA4
A
225 232Right-handed 310
Helix 5
AA5
A
233 253Right-handed alpha
Helix 6
AA6
A
285 287Right-handed 310
Helix 7
AA7
A
293 313Right-handed alpha
Helix 8
AA8
A
321 323Right-handed 310
Helix 9
AA9
A
324 344Right-handed alpha
Helix 10
AB1
A
348 356Right-handed alpha
Helix 11
AB2
A
356 366Right-handed alpha
Helix 12
AB3
A
379 387Right-handed alpha
Helix 13
AB4
A
388 407Right-handed alpha
Helix 14
AB5
A
407 423Right-handed alpha
Helix 15
AB6
A
428 441Right-handed alpha
Helix 16
AB7
A
446 452Right-handed alpha
Helix 17
AB8
A
526 529Right-handed 310
Helix 18
AB9
A
542 544Right-handed 310
Helix 19
AC1
A
552 563Right-handed alpha
Helix 20
AC2
A
564 566Right-handed 310
Helix 21
AC3
A
568 585Right-handed alpha
Helix 22
AC4
A
589 599Right-handed alpha
Helix 23
AC5
A
604 609Right-handed 310
Helix 24
AC6
A
611 629Right-handed alpha
Helix 25
AC7
A
631 633Right-handed 310
Helix 26
AC8
A
634 653Right-handed alpha
Helix 27
AC9
A
657 669Right-handed alpha
Helix 28
AD1
A
673 686Right-handed alpha
Helix 29
AD2
A
696 710Right-handed alpha
Helix 30
AD3
A
714 725Right-handed alpha
Helix 31
AD4
A
727 740Right-handed alpha
Helix 32
AD5
A
743 757Right-handed alpha
Helix 33
AD6
A
761 770Right-handed alpha
Helix 34
AD7
A
777 782Right-handed 310
Helix 35
AD8
A
783 799Right-handed alpha
Helix 36
AD9
A
800 811Right-handed alpha
Helix 37
AE1
A
818 831Right-handed alpha
Helix 38
AE2
A
834 859Right-handed alpha
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There are 7 sheets in PDB entry 7V9N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
75 76first strand
Strand 2
A
66 72anti-parallel
Strand 3
A
96 106anti-parallel
Strand 4
A
40 51anti-parallel
Strand 5
A
18 28anti-parallel
Strand 6
A
151 159parallel
Strand 7
A
179 184anti-parallel
Strand 8
A
170 174anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
88 90anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 118first strand
Strand 2
A
125 130anti-parallel
Strand 3
A
197 200anti-parallel
Strand 4
A
163 166anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 209first strand
Strand 2
A
218 224anti-parallel
Strand 3
A
261 266parallel
Strand 4
A
279 283parallel
Strand 5
A
273 274anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 319first strand
Strand 2
A
425 427parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
522 524first strand
Strand 2
A
472 479anti-parallel
Strand 3
A
459 466anti-parallel
Strand 4
A
548 549parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 518first strand
Strand 2
A
492 501anti-parallel
Strand 3
A
536 541anti-parallel
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