Analysis of interatomic Contacts of Structural Units in PDB entry:
7V9X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7V9X entry

There are 9 chains in PDB entry 7V9X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 3ASN 316
C
 MET 1HIS 306
D
 G 1 G 85
E
 C 8 C 81
F
 C 0 G 7
B
 SER 3ASN 316
G
 G 1 G 85
H
 C 8 C 81
I
 C 0 G 7
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 7V9X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 14Right-handed alpha
Helix 2
AA2
A
22 31Right-handed alpha
Helix 3
AA3
A
33 44Right-handed alpha
Helix 4
AA4
A
69 83Right-handed alpha
Helix 5
AA5
A
84 87Right-handed 310
Helix 6
AA6
A
102 107Right-handed alpha
Helix 7
AA7
A
108 110Right-handed 310
Helix 8
AA8
A
122 127Right-handed alpha
Helix 9
AA9
A
129 139Right-handed alpha
Helix 10
AB1
A
144 154Right-handed alpha
Helix 11
AB2
A
165 174Right-handed alpha
Helix 12
AB3
A
174 188Right-handed alpha
Helix 13
AB4
A
205 220Right-handed alpha
Helix 14
AB5
A
221 224Right-handed 310
Helix 15
AB6
A
256 272Right-handed alpha
Helix 16
AB7
A
277 292Right-handed alpha
Helix 17
AB8
A
292 311Right-handed alpha
Helix 18
AB9
C
8 19Right-handed alpha
Helix 19
AC1
C
202 213Right-handed alpha
Helix 20
AC2
C
217 230Right-handed alpha
Helix 21
AC3
C
236 250Right-handed alpha
Helix 22
AC4
C
263 274Right-handed alpha
Helix 23
AC5
C
277 292Right-handed alpha
Helix 24
AC6
B
4 15Right-handed alpha
Helix 25
AC7
B
22 31Right-handed alpha
Helix 26
AC8
B
33 43Right-handed alpha
Helix 27
AC9
B
44 46Right-handed 310
Helix 28
AD1
B
69 83Right-handed alpha
Helix 29
AD2
B
84 87Right-handed 310
Helix 30
AD3
B
102 107Right-handed alpha
Helix 31
AD4
B
108 110Right-handed 310
Helix 32
AD5
B
123 127Right-handed 310
Helix 33
AD6
B
128 139Right-handed alpha
Helix 34
AD7
B
142 154Right-handed alpha
Helix 35
AD8
B
165 174Right-handed alpha
Helix 36
AD9
B
175 188Right-handed alpha
Helix 37
AE1
B
205 220Right-handed alpha
Helix 38
AE2
B
221 224Right-handed 310
Helix 39
AE3
B
256 273Right-handed alpha
Helix 40
AE4
B
277 292Right-handed alpha
Helix 41
AE5
B
292 310Right-handed alpha
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There are 8 sheets in PDB entry 7V9X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 53first strand
Strand 2
A
63 68anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 195first strand
Strand 2
A
198 203anti-parallel
Strand 3
A
114 119anti-parallel
Strand 4
A
233 235anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
A
246 248anti-parallel
Strand 3
A
253 254anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
253 256first strand
Strand 2
C
259 262anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 53first strand
Strand 2
B
63 68anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 194first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
114 121anti-parallel
Strand 4
B
226 227anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
191 194first strand
Strand 2
B
198 203anti-parallel
Strand 3
B
114 121anti-parallel
Strand 4
B
233 235anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
242 243first strand
Strand 2
B
246 248anti-parallel
Strand 3
B
253 254anti-parallel
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