Analysis of interatomic Contacts of Structural Units in PDB entry:
7VA1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VA1 entry

There are 4 chains in PDB entry 7VA1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASN 102ALA 291
A
 ASN 102ARG 294
C
 ASN 102SER 293
D
 ASN 102ALA 291
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 7VA1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
102 120Right-handed alpha
Helix 2
AA2
B
120 130Right-handed alpha
Helix 3
AA3
B
154 166Right-handed alpha
Helix 4
AA4
B
179 186Right-handed alpha
Helix 5
AA5
B
192 197Right-handed alpha
Helix 6
AA6
B
198 200Right-handed 310
Helix 7
AA7
B
210 214Right-handed 310
Helix 8
AA8
B
218 225Right-handed alpha
Helix 9
AA9
B
241 252Right-handed alpha
Helix 10
AB1
B
270 275Right-handed alpha
Helix 11
AB2
A
103 120Right-handed alpha
Helix 12
AB3
A
120 130Right-handed alpha
Helix 13
AB4
A
154 166Right-handed alpha
Helix 14
AB5
A
179 186Right-handed alpha
Helix 15
AB6
A
192 197Right-handed alpha
Helix 16
AB7
A
198 200Right-handed 310
Helix 17
AB8
A
218 225Right-handed alpha
Helix 18
AB9
A
241 252Right-handed alpha
Helix 19
AC1
A
270 275Right-handed alpha
Helix 20
AC2
A
288 294Right-handed alpha
Helix 21
AC3
C
103 120Right-handed alpha
Helix 22
AC4
C
120 130Right-handed alpha
Helix 23
AC5
C
154 166Right-handed alpha
Helix 24
AC6
C
179 186Right-handed alpha
Helix 25
AC7
C
192 197Right-handed alpha
Helix 26
AC8
C
198 200Right-handed 310
Helix 27
AC9
C
218 225Right-handed alpha
Helix 28
AD1
C
241 252Right-handed alpha
Helix 29
AD2
C
270 275Right-handed alpha
Helix 30
AD3
C
289 293Right-handed 310
Helix 31
AD4
D
103 120Right-handed alpha
Helix 32
AD5
D
120 130Right-handed alpha
Helix 33
AD6
D
135 139Right-handed 310
Helix 34
AD7
D
154 166Right-handed alpha
Helix 35
AD8
D
179 186Right-handed alpha
Helix 36
AD9
D
192 197Right-handed alpha
Helix 37
AE1
D
198 200Right-handed 310
Helix 38
AE2
D
218 225Right-handed alpha
Helix 39
AE3
D
241 252Right-handed alpha
Helix 40
AE4
D
270 275Right-handed alpha
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There are 4 sheets in PDB entry 7VA1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
189 190first strand
Strand 2
B
170 174parallel
Strand 3
B
147 151parallel
Strand 4
B
202 205parallel
Strand 5
B
230 233parallel
Strand 6
B
256 259parallel
Strand 7
B
278 280parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 190first strand
Strand 2
A
170 174parallel
Strand 3
A
147 151parallel
Strand 4
A
202 205parallel
Strand 5
A
230 233parallel
Strand 6
A
256 259parallel
Strand 7
A
278 280parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
189 190first strand
Strand 2
C
170 174parallel
Strand 3
C
147 151parallel
Strand 4
C
202 205parallel
Strand 5
C
230 233parallel
Strand 6
C
256 259parallel
Strand 7
C
278 280parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
189 190first strand
Strand 2
D
170 174parallel
Strand 3
D
147 151parallel
Strand 4
D
202 205parallel
Strand 5
D
230 233parallel
Strand 6
D
256 259parallel
Strand 7
D
278 280parallel
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