Analysis of interatomic Contacts of Structural Units in PDB entry:
7VA2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VA2 entry

There are 2 chains in PDB entry 7VA2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 180
B
 MET 1LEU 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 7VA2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
50 56Right-handed alpha
Helix 2
AA2
A
58 69Right-handed alpha
Helix 3
AA3
A
69 77Right-handed alpha
Helix 4
AA4
A
80 94Right-handed alpha
Helix 5
AA5
A
107 119Right-handed alpha
Helix 6
AA6
A
119 124Right-handed alpha
Helix 7
AA7
A
133 144Right-handed alpha
Helix 8
AA8
A
144 149Right-handed alpha
Helix 9
AA9
A
158 177Right-handed alpha
Helix 10
AB1
B
50 56Right-handed alpha
Helix 11
AB2
B
58 69Right-handed alpha
Helix 12
AB3
B
69 77Right-handed alpha
Helix 13
AB4
B
80 93Right-handed alpha
Helix 14
AB5
B
107 119Right-handed alpha
Helix 15
AB6
B
119 126Right-handed alpha
Helix 16
AB7
B
133 144Right-handed alpha
Helix 17
AB8
B
144 150Right-handed alpha
Helix 18
AB9
B
158 177Right-handed alpha
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There are 4 sheets in PDB entry 7VA2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
24 32anti-parallel
Strand 3
A
45 46anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 41first strand
Strand 2
A
24 32anti-parallel
Strand 3
A
7 14anti-parallel
Strand 4
A
103 105parallel
Strand 5
A
130 132parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
24 32anti-parallel
Strand 3
B
45 46anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 41first strand
Strand 2
B
24 32anti-parallel
Strand 3
B
7 14anti-parallel
Strand 4
B
103 105parallel
Strand 5
B
130 132parallel
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