Analysis of interatomic Contacts of Structural Units in PDB entry:
7VBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VBW entry

There is 1 chain in PDB entry 7VBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 139ILE 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7VBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
140 154Right-handed alpha
Helix 2
AA2
A
169 181Right-handed alpha
Helix 3
AA3
A
183 187Right-handed 310
Helix 4
AA4
A
195 197Right-handed 310
Helix 5
AA5
A
198 208Right-handed alpha
Helix 6
AA6
A
223 228Right-handed alpha
Helix 7
AA7
A
238 241Right-handed 310
Helix 8
AA8
A
242 256Right-handed alpha
Helix 9
AA9
A
280 287Right-handed alpha
Helix 10
AB1
A
291 299Right-handed alpha
Helix 11
AB2
A
307 312Right-handed alpha
Helix 12
AB3
A
312 329Right-handed alpha
Helix 13
AB4
A
329 335Right-handed alpha
Helix 14
AB5
A
340 349Right-handed alpha
Helix 15
AB6
A
354 374Right-handed alpha
Helix 16
AB7
A
377 385Right-handed alpha
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There are 2 sheets in PDB entry 7VBW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
189 193first strand
Strand 2
A
232 236parallel
Strand 3
A
272 277parallel
Strand 4
A
160 163parallel
Strand 5
A
301 304parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
267 268anti-parallel
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