Analysis of interatomic Contacts of Structural Units in PDB entry:
7VEP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VEP entry

There is 1 chain in PDB entry 7VEP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 3GLU 276
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 7VEP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 24Right-handed alpha
Helix 2
AA2
A
37 52Right-handed alpha
Helix 3
AA3
A
55 65Right-handed alpha
Helix 4
AA4
A
69 79Right-handed alpha
Helix 5
AA5
A
80 83Right-handed 310
Helix 6
AA6
A
84 91Right-handed alpha
Helix 7
AA7
A
113 128Right-handed alpha
Helix 8
AA8
A
130 140Right-handed alpha
Helix 9
AA9
A
145 163Right-handed alpha
Helix 10
AB1
A
165 173Right-handed alpha
Helix 11
AB2
A
181 199Right-handed alpha
Helix 12
AB3
A
201 214Right-handed alpha
Helix 13
AB4
A
215 217Right-handed 310
Helix 14
AB5
A
218 236Right-handed alpha
Helix 15
AB6
A
238 253Right-handed alpha
Helix 16
AB7
A
256 265Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 7VEP.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
108 110anti-parallel
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