Analysis of interatomic Contacts of Structural Units in PDB entry:
7VF2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VF2 entry

There are 4 chains in PDB entry 7VF2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 333THR 1585
B
 PRO 1492CYS 1643
C
 GLN 64SER 247
D
 GLN 64SER 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 7VF2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
357 369Right-handed alpha
Helix 2
AA2
A
374 390Right-handed alpha
Helix 3
AA3
A
397 405Right-handed alpha
Helix 4
AA4
A
406 410Right-handed 310
Helix 5
AA5
A
413 421Right-handed alpha
Helix 6
AA6
A
426 439Right-handed alpha
Helix 7
AA7
A
440 445Right-handed alpha
Helix 8
AA8
A
451 468Right-handed alpha
Helix 9
AA9
A
469 480Right-handed alpha
Helix 10
AB1
A
482 490Right-handed alpha
Helix 11
AB2
A
496 511Right-handed alpha
Helix 12
AB3
A
513 522Right-handed alpha
Helix 13
AB4
A
529 539Right-handed alpha
Helix 14
AB5
A
543 579Right-handed alpha
Helix 15
AB6
A
620 640Right-handed alpha
Helix 16
AB7
A
640 645Right-handed alpha
Helix 17
AB8
A
668 679Right-handed alpha
Helix 18
AB9
A
680 691Right-handed alpha
Helix 19
AC1
A
691 697Right-handed alpha
Helix 20
AC2
A
697 712Right-handed alpha
Helix 21
AC3
A
714 724Right-handed alpha
Helix 22
AC4
A
724 746Right-handed alpha
Helix 23
AC5
A
756 776Right-handed alpha
Helix 24
AC6
A
789 801Right-handed alpha
Helix 25
AC7
A
802 804Right-handed 310
Helix 26
AC8
A
805 816Right-handed alpha
Helix 27
AC9
A
822 833Right-handed alpha
Helix 28
AD1
A
845 862Right-handed alpha
Helix 29
AD2
A
865 882Right-handed alpha
Helix 30
AD3
A
887 896Right-handed alpha
Helix 31
AD4
A
897 899Right-handed 310
Helix 32
AD5
A
907 918Right-handed alpha
Helix 33
AD6
A
928 940Right-handed alpha
Helix 34
AD7
A
954 966Right-handed alpha
Helix 35
AD8
A
969 989Right-handed alpha
Helix 36
AD9
A
995 1021Right-handed alpha
Helix 37
AE1
A
1032 1045Right-handed alpha
Helix 38
AE2
A
1054 1070Right-handed alpha
Helix 39
AE3
A
1076 1080Right-handed 310
Helix 40
AE4
A
1082 1087Right-handed alpha
Helix 41
AE5
A
1089 1100Right-handed alpha
Helix 42
AE6
A
1108 1120Right-handed alpha
Helix 43
AE7
A
1133 1152Right-handed alpha
Helix 44
AE8
A
1154 1165Right-handed alpha
Helix 45
AE9
A
1170 1184Right-handed alpha
Helix 46
AF1
A
1188 1208Right-handed alpha
Helix 47
AF2
A
1219 1234Right-handed alpha
Helix 48
AF3
A
1235 1247Right-handed alpha
Helix 49
AF4
A
1253 1268Right-handed alpha
Helix 50
AF5
A
1275 1291Right-handed alpha
Helix 51
AF6
A
1308 1314Right-handed alpha
Helix 52
AF7
A
1319 1336Right-handed alpha
Helix 53
AF8
A
1340 1355Right-handed alpha
Helix 54
AF9
A
1357 1369Right-handed alpha
Helix 55
AG1
A
1373 1385Right-handed alpha
Helix 56
AG2
A
1390 1406Right-handed alpha
Helix 57
AG3
A
1434 1443Right-handed alpha
Helix 58
AG4
A
1447 1461Right-handed alpha
Helix 59
AG5
A
1468 1486Right-handed alpha
Helix 60
AG6
A
1507 1514Right-handed alpha
Helix 61
AG7
A
1525 1530Right-handed alpha
Helix 62
AG8
A
1554 1559Right-handed alpha
Helix 63
AG9
A
1565 1575Right-handed alpha
Helix 64
AH1
B
1517 1521Right-handed 310
Helix 65
AH2
B
1522 1531Right-handed alpha
Helix 66
AH3
B
1533 1538Right-handed alpha
Helix 67
AH4
B
1538 1551Right-handed alpha
Helix 68
AH5
B
1555 1561Right-handed alpha
Helix 69
AH6
B
1567 1583Right-handed alpha
Helix 70
AH7
B
1596 1608Right-handed alpha
Helix 71
AH8
B
1626 1643Right-handed alpha
Helix 72
AH9
C
65 98Right-handed alpha
Helix 73
AI1
C
102 112Right-handed alpha
Helix 74
AI2
C
114 146Right-handed alpha
Helix 75
AI3
C
151 175Right-handed alpha
Helix 76
AI4
C
176 243Right-handed alpha
Helix 77
AI5
D
66 100Right-handed alpha
Helix 78
AI6
D
104 109Right-handed alpha
Helix 79
AI7
D
114 145Right-handed alpha
Helix 80
AI8
D
148 178Right-handed alpha
Helix 81
AI9
D
178 244Right-handed alpha
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There are 3 sheets in PDB entry 7VF2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
657 658first strand
Strand 2
A
952 953parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1126 1128first strand
Strand 2
A
1518 1520parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1549 1551first strand
Strand 2
D
111 113anti-parallel
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