Analysis of interatomic Contacts of Structural Units in PDB entry:
7VG2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VG2 entry

There are 3 chains in PDB entry 7VG2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 620GLN 1569
C
 A 1 U 35
D
 A 6 C 41
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 7VG2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
710 729Right-handed alpha
Helix 2
AA2
A
778 795Right-handed alpha
Helix 3
AA3
A
879 888Right-handed alpha
Helix 4
AA4
A
942 944Right-handed 310
Helix 5
AA5
A
952 960Right-handed alpha
Helix 6
AA6
A
961 983Right-handed alpha
Helix 7
AA7
A
992 1000Right-handed alpha
Helix 8
AA8
A
1011 1034Right-handed alpha
Helix 9
AA9
A
1038 1050Right-handed alpha
Helix 10
AB1
A
1051 1061Right-handed alpha
Helix 11
AB2
A
1128 1159Right-handed alpha
Helix 12
AB3
A
1165 1174Right-handed alpha
Helix 13
AB4
A
1186 1196Right-handed alpha
Helix 14
AB5
A
1202 1210Right-handed alpha
Helix 15
AB6
A
1211 1215Right-handed 310
Helix 16
AB7
A
1220 1243Right-handed alpha
Helix 17
AB8
A
1250 1259Right-handed alpha
Helix 18
AB9
A
1260 1271Right-handed alpha
Helix 19
AC1
A
1272 1276Right-handed 310
Helix 20
AC2
A
1281 1294Right-handed alpha
Helix 21
AC3
A
1311 1329Right-handed alpha
Helix 22
AC4
A
1332 1341Right-handed alpha
Helix 23
AC5
A
1356 1369Right-handed alpha
Helix 24
AC6
A
1405 1422Right-handed alpha
Helix 25
AC7
A
1475 1488Right-handed alpha
Helix 26
AC8
A
1544 1563Right-handed alpha
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There are 6 sheets in PDB entry 7VG2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1107 1108first strand
Strand 2
A
628 631anti-parallel
Strand 3
A
1124 1126anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
687 691first strand
Strand 2
A
696 708anti-parallel
Strand 3
A
651 661anti-parallel
Strand 4
A
671 675anti-parallel
Strand 5
A
764 765anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
828 829first strand
Strand 2
A
834 835anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
938 941first strand
Strand 2
A
900 904anti-parallel
Strand 3
A
853 859anti-parallel
Strand 4
A
844 847anti-parallel
Strand 5
A
946 948anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1372 1377first strand
Strand 2
A
1383 1390anti-parallel
Strand 3
A
1395 1402anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1494 1496first strand
Strand 2
A
1524 1527anti-parallel
Strand 3
A
1535 1536anti-parallel
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