Analysis of interatomic Contacts of Structural Units in PDB entry:
7VG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VG7 entry

There are 2 chains in PDB entry 7VG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 20LEU 534
B
 CYS 24ASN 174
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 7VG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 117Right-handed 310
Helix 2
AA2
A
193 197Right-handed 310
Helix 3
AA3
A
210 215Right-handed alpha
Helix 4
AA4
A
270 272Right-handed 310
Helix 5
AA5
A
313 316Right-handed 310
Helix 6
AA6
A
326 343Right-handed alpha
Helix 7
AA7
A
369 375Right-handed alpha
Helix 8
AA8
A
481 485Right-handed 310
Helix 9
AA9
A
487 494Right-handed alpha
Helix 10
AB1
A
510 514Right-handed 310
Helix 11
AB2
B
25 36Right-handed alpha
Helix 12
AB3
B
38 48Right-handed alpha
Helix 13
AB4
B
53 68Right-handed alpha
Helix 14
AB5
B
70 85Right-handed alpha
Helix 15
AB6
B
107 120Right-handed alpha
Helix 16
AB7
B
121 130Right-handed alpha
Helix 17
AB8
B
131 133Right-handed 310
Helix 18
AB9
B
135 150Right-handed alpha
Helix 19
AC1
B
153 169Right-handed alpha
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There are 11 sheets in PDB entry 7VG7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
474 478anti-parallel
Strand 3
A
465 469anti-parallel
Strand 4
A
458 459anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
35 40first strand
Strand 2
A
47 51anti-parallel
Strand 3
A
54 58anti-parallel
Strand 4
A
64 69anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 75first strand
Strand 2
A
92 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 104first strand
Strand 2
A
107 112anti-parallel
Strand 3
A
119 123anti-parallel
Strand 4
A
126 132anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 158first strand
Strand 2
A
164 170anti-parallel
Strand 3
A
184 188anti-parallel
Strand 4
A
200 205anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 224first strand
Strand 2
A
227 235anti-parallel
Strand 3
A
244 252anti-parallel
Strand 4
A
262 268anti-parallel
Strand 5
A
386 388parallel
Strand 6
A
354 356anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
217 224first strand
Strand 2
A
227 235anti-parallel
Strand 3
A
244 252anti-parallel
Strand 4
A
262 268anti-parallel
Strand 5
A
392 394parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 281first strand
Strand 2
A
292 298anti-parallel
Strand 3
A
318 325anti-parallel
Strand 4
A
396 401anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
405 413first strand
Strand 2
A
416 423anti-parallel
Strand 3
A
427 432anti-parallel
Strand 4
A
443 446anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
507 509first strand
Strand 2
A
500 502anti-parallel
Strand 3
A
523 525anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
93 96first strand
Strand 2
B
103 106anti-parallel
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