Analysis of interatomic Contacts of Structural Units in PDB entry:
7VH0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VH0 entry

There are 5 chains in PDB entry 7VH0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 38LEU 323
B
 LEU 5PHE 354
C
 ASP 5ASN 340
D
 ILE 9ARG 62
E
 VAL 2LEU 247
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 7VH0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 68Right-handed alpha
Helix 2
AA2
A
68 73Right-handed alpha
Helix 3
AA3
A
77 92Right-handed alpha
Helix 4
AA4
A
92 103Right-handed alpha
Helix 5
AA5
A
109 117Right-handed alpha
Helix 6
AA6
A
118 128Right-handed alpha
Helix 7
AA7
A
133 141Right-handed alpha
Helix 8
AA8
A
145 151Right-handed alpha
Helix 9
AA9
A
155 171Right-handed alpha
Helix 10
AB1
A
173 179Right-handed alpha
Helix 11
AB2
A
193 197Right-handed 310
Helix 12
AB3
A
198 209Right-handed alpha
Helix 13
AB4
A
210 235Right-handed alpha
Helix 14
AB5
A
260 277Right-handed alpha
Helix 15
AB6
A
286 304Right-handed alpha
Helix 16
AB7
A
313 323Right-handed alpha
Helix 17
AB8
B
8 30Right-handed alpha
Helix 18
AB9
B
42 52Right-handed alpha
Helix 19
AC1
B
207 216Right-handed 310
Helix 20
AC2
B
242 255Right-handed alpha
Helix 21
AC3
B
270 278Right-handed alpha
Helix 22
AC4
B
282 286Right-handed 310
Helix 23
AC5
B
295 310Right-handed alpha
Helix 24
AC6
B
327 352Right-handed alpha
Helix 25
AC7
C
6 25Right-handed alpha
Helix 26
AC8
C
29 34Right-handed alpha
Helix 27
AC9
D
10 23Right-handed alpha
Helix 28
AD1
D
29 44Right-handed alpha
Helix 29
AD2
D
45 48Right-handed 310
Helix 30
AD3
E
28 32Right-handed 310
Helix 31
AD4
E
61 65Right-handed 310
Helix 32
AD5
E
220 224Right-handed 310
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There are 13 sheets in PDB entry 7VH0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
185 190first strand
Strand 2
B
195 200anti-parallel
Strand 3
B
34 40parallel
Strand 4
B
220 226parallel
Strand 5
B
263 269parallel
Strand 6
B
320 323parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
47 51first strand
Strand 2
C
336 339anti-parallel
Strand 3
C
327 331anti-parallel
Strand 4
C
315 320anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
58 63first strand
Strand 2
C
69 74anti-parallel
Strand 3
C
78 83anti-parallel
Strand 4
C
89 94anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 105first strand
Strand 2
C
111 116anti-parallel
Strand 3
C
120 125anti-parallel
Strand 4
C
135 140anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 151first strand
Strand 2
C
157 161anti-parallel
Strand 3
C
166 168anti-parallel
Strand 4
C
178 180anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
191 192first strand
Strand 2
C
198 201anti-parallel
Strand 3
C
207 212anti-parallel
Strand 4
C
218 223anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
229 232first strand
Strand 2
C
240 245anti-parallel
Strand 3
C
249 254anti-parallel
Strand 4
C
262 265anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
273 278first strand
Strand 2
C
284 289anti-parallel
Strand 3
C
294 298anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
3 7first strand
Strand 2
E
17 25anti-parallel
Strand 3
E
78 84anti-parallel
Strand 4
E
69 73anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
45 51first strand
Strand 2
E
33 39anti-parallel
Strand 3
E
93 99anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
146 148first strand
Strand 2
E
243 246parallel
Strand 3
E
225 231anti-parallel
Strand 4
E
174 179anti-parallel
Strand 5
E
186 190anti-parallel
Strand 6
E
194 195anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
146 148first strand
Strand 2
E
243 246parallel
Strand 3
E
225 231anti-parallel
Strand 4
E
238 239anti-parallel
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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
155 160first strand
Strand 2
E
211 216anti-parallel
Strand 3
E
203 208anti-parallel
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