Analysis of interatomic Contacts of Structural Units in PDB entry:
7VH2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VH2 entry

There is 1 chain in PDB entry 7VH2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2SER 1816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 7VH2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 12Right-handed alpha
Helix 2
AA2
A
19 28Right-handed alpha
Helix 3
AA3
A
45 58Right-handed alpha
Helix 4
AA4
A
69 74Right-handed alpha
Helix 5
AA5
A
111 124Right-handed alpha
Helix 6
AA6
A
130 134Right-handed 310
Helix 7
AA7
A
156 163Right-handed alpha
Helix 8
AA8
A
163 175Right-handed alpha
Helix 9
AA9
A
184 191Right-handed alpha
Helix 10
AB1
A
200 204Right-handed 310
Helix 11
AB2
A
214 221Right-handed alpha
Helix 12
AB3
A
231 250Right-handed alpha
Helix 13
AB4
A
262 275Right-handed alpha
Helix 14
AB5
A
284 288Right-handed 310
Helix 15
AB6
A
289 299Right-handed alpha
Helix 16
AB7
A
322 339Right-handed alpha
Helix 17
AB8
A
347 366Right-handed alpha
Helix 18
AB9
A
396 410Right-handed alpha
Helix 19
AC1
A
440 451Right-handed alpha
Helix 20
AC2
A
482 501Right-handed alpha
Helix 21
AC3
A
574 578Right-handed 310
Helix 22
AC4
A
584 597Right-handed alpha
Helix 23
AC5
A
602 623Right-handed alpha
Helix 24
AC6
A
626 634Right-handed alpha
Helix 25
AC7
A
634 644Right-handed alpha
Helix 26
AC8
A
663 679Right-handed alpha
Helix 27
AC9
A
688 702Right-handed alpha
Helix 28
AD1
A
703 706Right-handed 310
Helix 29
AD2
A
713 732Right-handed alpha
Helix 30
AD3
A
745 760Right-handed alpha
Helix 31
AD4
A
776 789Right-handed alpha
Helix 32
AD5
A
835 852Right-handed alpha
Helix 33
AD6
A
867 874Right-handed alpha
Helix 34
AD7
A
887 895Right-handed alpha
Helix 35
AD8
A
898 918Right-handed alpha
Helix 36
AD9
A
962 970Right-handed alpha
Helix 37
AE1
A
983 988Right-handed alpha
Helix 38
AE2
A
1009 1014Right-handed alpha
Helix 39
AE3
A
1015 1018Right-handed 310
Helix 40
AE4
A
1024 1035Right-handed alpha
Helix 41
AE5
A
1087 1094Right-handed 310
Helix 42
AE6
A
1135 1156Right-handed alpha
Helix 43
AE7
A
1164 1179Right-handed alpha
Helix 44
AE8
A
1191 1196Right-handed alpha
Helix 45
AE9
A
1197 1207Right-handed alpha
Helix 46
AF1
A
1221 1233Right-handed alpha
Helix 47
AF2
A
1239 1244Right-handed alpha
Helix 48
AF3
A
1265 1271Right-handed alpha
Helix 49
AF4
A
1295 1318Right-handed alpha
Helix 50
AF5
A
1351 1363Right-handed alpha
Helix 51
AF6
A
1364 1366Right-handed 310
Helix 52
AF7
A
1395 1405Right-handed alpha
Helix 53
AF8
A
1414 1429Right-handed alpha
Helix 54
AF9
A
1433 1451Right-handed alpha
Helix 55
AG1
A
1472 1483Right-handed alpha
Helix 56
AG2
A
1491 1506Right-handed alpha
Helix 57
AG3
A
1515 1520Right-handed alpha
Helix 58
AG4
A
1523 1535Right-handed alpha
Helix 59
AG5
A
1538 1545Right-handed alpha
Helix 60
AG6
A
1579 1589Right-handed alpha
Helix 61
AG7
A
1613 1623Right-handed alpha
Helix 62
AG8
A
1639 1644Right-handed alpha
Helix 63
AG9
A
1665 1669Right-handed 310
Helix 64
AH1
A
1678 1692Right-handed alpha
Helix 65
AH2
A
1730 1735Right-handed alpha
Helix 66
AH3
A
1736 1740Right-handed 310
Helix 67
AH4
A
1743 1750Right-handed alpha
Helix 68
AH5
A
1789 1794Right-handed alpha
Helix 69
AH6
A
1806 1808Right-handed 310
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There are 13 sheets in PDB entry 7VH2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
97 98first strand
Strand 2
A
136 137parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
104 105first strand
Strand 2
A
143 144parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
646 648anti-parallel
Strand 3
A
1374 1375anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
392 393first strand
Strand 2
A
528 534anti-parallel
Strand 3
A
540 545anti-parallel
Strand 4
A
558 560anti-parallel
Strand 5
A
565 567anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 459first strand
Strand 2
A
522 524anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 554first strand
Strand 2
A
572 573anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1117first strand
Strand 2
A
1234 1236parallel
Strand 3
A
1284 1286anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1120 1121first strand
Strand 2
A
1130 1131anti-parallel
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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1183 1184first strand
Strand 2
A
1331 1335anti-parallel
Strand 3
A
1323 1326anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1379 1380first strand
Strand 2
A
1387 1388anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1548 1550first strand
Strand 2
A
1675 1677anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1630 1631first strand
Strand 2
A
1637 1638anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1716 1718first strand
Strand 2
A
1802 1804anti-parallel
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