Analysis of interatomic Contacts of Structural Units in PDB entry:
7VH3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 7VH3 entry

There is 1 chain in PDB entry 7VH3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2SER 1816
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 7VH3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 12Right-handed alpha
Helix 2
AA2
A
19 27Right-handed alpha
Helix 3
AA3
A
34 39Right-handed alpha
Helix 4
AA4
A
43 58Right-handed alpha
Helix 5
AA5
A
68 74Right-handed alpha
Helix 6
AA6
A
108 125Right-handed alpha
Helix 7
AA7
A
126 131Right-handed alpha
Helix 8
AA8
A
132 134Right-handed 310
Helix 9
AA9
A
164 175Right-handed alpha
Helix 10
AB1
A
184 191Right-handed alpha
Helix 11
AB2
A
200 204Right-handed 310
Helix 12
AB3
A
214 223Right-handed alpha
Helix 13
AB4
A
231 250Right-handed alpha
Helix 14
AB5
A
262 274Right-handed alpha
Helix 15
AB6
A
284 289Right-handed alpha
Helix 16
AB7
A
291 300Right-handed alpha
Helix 17
AB8
A
322 339Right-handed alpha
Helix 18
AB9
A
347 366Right-handed alpha
Helix 19
AC1
A
396 410Right-handed alpha
Helix 20
AC2
A
418 422Right-handed 310
Helix 21
AC3
A
440 449Right-handed alpha
Helix 22
AC4
A
479 499Right-handed alpha
Helix 23
AC5
A
574 578Right-handed 310
Helix 24
AC6
A
584 598Right-handed alpha
Helix 25
AC7
A
602 623Right-handed alpha
Helix 26
AC8
A
626 644Right-handed alpha
Helix 27
AC9
A
651 656Right-handed alpha
Helix 28
AD1
A
661 680Right-handed alpha
Helix 29
AD2
A
688 702Right-handed alpha
Helix 30
AD3
A
703 706Right-handed 310
Helix 31
AD4
A
713 732Right-handed alpha
Helix 32
AD5
A
745 760Right-handed alpha
Helix 33
AD6
A
776 788Right-handed alpha
Helix 34
AD7
A
835 852Right-handed alpha
Helix 35
AD8
A
867 873Right-handed alpha
Helix 36
AD9
A
887 895Right-handed alpha
Helix 37
AE1
A
898 918Right-handed alpha
Helix 38
AE2
A
961 969Right-handed alpha
Helix 39
AE3
A
983 988Right-handed alpha
Helix 40
AE4
A
1009 1014Right-handed alpha
Helix 41
AE5
A
1024 1033Right-handed alpha
Helix 42
AE6
A
1087 1091Right-handed 310
Helix 43
AE7
A
1135 1156Right-handed alpha
Helix 44
AE8
A
1163 1181Right-handed alpha
Helix 45
AE9
A
1191 1196Right-handed alpha
Helix 46
AF1
A
1197 1206Right-handed alpha
Helix 47
AF2
A
1221 1233Right-handed alpha
Helix 48
AF3
A
1265 1273Right-handed alpha
Helix 49
AF4
A
1295 1318Right-handed alpha
Helix 50
AF5
A
1351 1364Right-handed alpha
Helix 51
AF6
A
1395 1405Right-handed alpha
Helix 52
AF7
A
1411 1428Right-handed alpha
Helix 53
AF8
A
1434 1450Right-handed alpha
Helix 54
AF9
A
1472 1483Right-handed alpha
Helix 55
AG1
A
1491 1506Right-handed alpha
Helix 56
AG2
A
1515 1520Right-handed alpha
Helix 57
AG3
A
1523 1535Right-handed alpha
Helix 58
AG4
A
1537 1545Right-handed alpha
Helix 59
AG5
A
1579 1590Right-handed alpha
Helix 60
AG6
A
1614 1624Right-handed alpha
Helix 61
AG7
A
1639 1646Right-handed alpha
Helix 62
AG8
A
1678 1692Right-handed alpha
Helix 63
AG9
A
1743 1750Right-handed alpha
Helix 64
AH1
A
1777 1782Right-handed alpha
Helix 65
AH2
A
1788 1792Right-handed 310
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There are 11 sheets in PDB entry 7VH3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
97 105anti-parallel
Strand 3
A
136 144parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
258 259first strand
Strand 2
A
646 648anti-parallel
Strand 3
A
1374 1375anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 388first strand
Strand 2
A
392 393anti-parallel
Strand 3
A
528 534anti-parallel
Strand 4
A
540 545anti-parallel
Strand 5
A
558 560anti-parallel
Strand 6
A
565 567anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
457 459first strand
Strand 2
A
522 524anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
553 554first strand
Strand 2
A
572 573anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1116 1117first strand
Strand 2
A
1235 1237parallel
Strand 3
A
1283 1284anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1120 1121first strand
Strand 2
A
1130 1131anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1183 1184first strand
Strand 2
A
1331 1335anti-parallel
Strand 3
A
1322 1326anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1548 1550first strand
Strand 2
A
1675 1677anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1630 1631first strand
Strand 2
A
1637 1638anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1716 1718first strand
Strand 2
A
1802 1804anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il